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RCircos
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1.1k
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display of chromosomes (on the linear scale) and translocations
ggviz
ggplot2
gviz
circlize
Rcircos
5.8 years ago
Bogdan
▴ 670
0
votes
2
replies
1.4k
views
circular genome visualisation: genomic.labels: Error in if (cr != chr) { : missing value where TRUE/FALSE needed
genomicfeatures
rcircos
6.3 years ago
chrisclarkson100
▴ 50
0
votes
0
replies
924
views
Synteny plots with OmicCircos or Rcircos
omiccircos
rcircos
6.7 years ago
mictadlo
▴ 10
0
votes
0
replies
944
views
[RCircos] Examples flagged as not run
rcircos
bug
6.7 years ago
Marcel Ramos
700
0
votes
1
reply
1.5k
views
Circos Tile colors
OmicCircos
RCircos
updated 7.1 years ago by
bernatgel
▴ 150 • written 7.1 years ago by
Radek
▴ 90
5 results • Page
1 of 1
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Answer: Documenting resources in an `ExperimentHub` package?
by
James W. MacDonald
66k
The easiest way to do that IMO is to use emacs/ESS (or I believe there is some newfangled thing called RStudio? Not personally familiar, bu…
Comment: ChAMP installation issue
by
shepherl
3.9k
We are still waiting for the goseq to respond to our requests but will take action next week if it is not resolved. ChAMP is currently una…
Comment: How to arrange multiple plots into one page in NOISeq?
by
baptiste.bidon
• 0
Hello everyone, I am new on this site but not a noob in R (I guess). I am facing the same problem. For me, it depends on the NOIseq plot fu…
Comment: ChAMP installation issue
by
Tahirah
• 0
Hello. Could you please share how you managed to install ChAMP in R 4.4.0? I also have R 4.4.0 and Bioconductor 3.19 version and ChAMP fail…
Answer: Identifying DEGs using limma - NanoString GeoMx-NGS RNA Expression Data
by
James W. MacDonald
66k
Yes, you can use `limma`.
Votes
how to control age and gender effect in expression data using DESeq2
Answer: Error retrieving ensembl gene id using biomaRt...
Comment: LRT, more than two conditions and pairwise comparisons
Answer: Control group between 2 batches have different expression in RNAseq data
Answer: How to remove batch effect to combine RNAseq data from 2 different experiments?
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