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omiccircos
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656
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Question about OmicCircos
OmicCircos
6.3 years ago
ch8316f5eyu
• 0
0
votes
0
replies
974
views
Synteny plots with OmicCircos or Rcircos
omiccircos
rcircos
6.8 years ago
mictadlo
▴ 10
0
votes
0
replies
974
views
Omiccircos: how to draw a circos plot for non-model organisms
omiccircos
seganglepo
sim.circos
circos
6.9 years ago
Didi
▴ 10
2
votes
3
replies
3.6k
views
Making a circos plot to show expression for a gene set rather than whole genome
Gene set
gene set analysis
omiccircos
updated 6.9 years ago by
yifangt
▴ 20 • written 9.5 years ago by
Peter.Wood
• 0
0
votes
0
replies
1.3k
views
OmicCircos: included UCSC.hg19.chr dataframe is actually hg18 cytobands
omiccircos
bug
hg19
hg18
data
7.2 years ago
matthew.bashton
• 0
0
votes
1
reply
1.6k
views
Circos Tile colors
OmicCircos
RCircos
updated 7.3 years ago by
bernatgel
▴ 150 • written 7.3 years ago by
Radek
▴ 90
0
votes
1
reply
2.4k
views
OmicCircos - Error in 1:scale.n : NA/NaN argument
OmicCircos
7.4 years ago
Stefan Langenberg
• 0
0
votes
0
replies
1.1k
views
OmicCircos Error in Colnames attribute mus be the same length as the vector
r
omiccircos
7.5 years ago
theobroma22
▴ 10
0
votes
0
replies
1.3k
views
OmicCircos barplot height and scale
omiccircos
7.5 years ago
Miss Agnieszka Aleksandra Golicz
▴ 40
0
votes
0
replies
784
views
OmicCircos for non human genomes
omiccircos
rnaseq
plants
7.6 years ago
Didi
▴ 10
0
votes
0
replies
901
views
Zoom function in OmicCircos
OmicCircos
Zoom
7.6 years ago
abmora
• 0
0
votes
0
replies
812
views
How to plot a single segment using OmicCircos?
omiccircos
7.9 years ago
Shambho
• 0
1
vote
0
replies
805
views
the 23re and 24th segs cannot be plotted
OmicCircos
8.1 years ago
magcj89
▴ 10
3
votes
2
replies
2.6k
views
How to represent a relationship between physical map and linkage map of a sequenced data using OmicCircos or another similar
omiccircos
software R
bioconductor for genomic data science
linkage disequilibrium
updated 8.3 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 8.3 years ago by
pertille
• 0
0
votes
0
replies
1.3k
views
Can OmicCircos handle chicken ChIA-PET interactome?
OmicCircos
chicken
8.6 years ago
Gary
▴ 20
0
votes
0
replies
1.5k
views
Circos Styling plots is now easy with canceR package
canceR
visualization
omiccircos
9.2 years ago
kmezhoud
▴ 10
0
votes
0
replies
1.4k
views
News:
OmicCircos was updated
visualization
omiccircos
News
9.4 years ago
Hu, Ying NIH/NCI [E]
▴ 50
1
vote
3
replies
1.5k
views
OmicCircos mapping data file.
omiccircos
updated 9.4 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 9.7 years ago by
abdul rawoof
▴ 60
0
votes
1
reply
1.8k
views
extdata missing for non-human OmicCircos plots?
OmicCircos
updated 9.4 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 9.8 years ago by
micahgearhart
• 0
0
votes
2
replies
2.0k
views
How to specifiy colors for polygon links when using circos function of OmicCircos package
graph
omiccircos
updated 9.4 years ago by
Hu, Ying NIH/NCI [E]
▴ 50 • written 9.4 years ago by
wei.shen
• 0
0
votes
1
reply
1.4k
views
Larger values masking others for OmicCircos heatmap
differential gene expression
heatmap
Circos
omiccircos
9.5 years ago
Peter.Wood
• 0
21 results • Page
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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