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RUVg
•
reset
4
votes
5
replies
2.6k
views
Removing unwanted variation (RUV) for paired analysis ?
ruvseq
edger
ruvg
removebatcheffect
updated 8.2 years ago by
Aaron Lun
★ 28k • written 8.2 years ago by
g.atla
▴ 10
4
votes
16
replies
7.4k
views
Normalised counts from RUVg in RUVSeq
RUVg
ruvseq
rnaseq
updated 7 weeks ago by
Shaimaa Gamal
• 0 • written 9.0 years ago by
Pauly Lin
▴ 150
2
votes
1
reply
1.5k
views
RUVSeq empirical negative controls? how many to take to find the span set
ruvseq
RUV
ruvnormalize
ruvg
7.8 years ago
anthonycolombo60
• 0
0
votes
3
replies
1.8k
views
RUVg weights in DESeq2
deseq2
ruvg
8.7 years ago
jordan.ramilowski
• 0
0
votes
1
reply
1.5k
views
Different Expression Analysis with EDASeq,DESeq2,edgeR,RUVSeq
deseq2
normalization
RUVg
edger
updated 4.7 years ago by
Michael Love
42k • written 4.7 years ago by
Yang WY
• 0
0
votes
1
reply
2.3k
views
Can FPKM or TPM values be used as RUVs input ?
ruvseq
ruvg
ruv
updated 7.3 years ago by
davide risso
▴ 950 • written 7.4 years ago by
weiwsmiling
• 0
0
votes
0
replies
776
views
removing confounding batch efffect with RUVg
RUVg
RNAseq
batch effect
5.2 years ago
gtechbio
▴ 10
7 results • Page
1 of 1
Recent ...
Replies
Comment: More regions in union when increasing DBA$config$mergeOverlap
by
Ziliang
• 0
I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…
Answer: SingleR Label.Ont
by
Denis
• 0
[Jackpot City Casino][1] is the perfect option when looking for an online casino in Canada for an exciting vacation and huge winnings that …
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…
Comment: deseq2 results
by
swbarnes2
★ 1.4k
Ask the people who made the libraires if there was anything unusual in the QC of the outlier sample. Try to figure out what biologically …
Comment: Can't post a question containing code?
by
NATASHA
• 0
did you find a solution? I´m having the same problem
Votes
A: AIC-like measure for DESeq2
Comment: Extremely small p-values using Limma for proteomic data
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
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