Bioconductor Ruvg

Showing : ruvg • reset

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1.2k

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deseq2 normalization RUVg edger

updated 4.1 years ago by Michael Love 40k • written 4.1 years ago by Yang WY • 0

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629

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RUVg RNAseq batch effect

4.5 years ago gtechbio ▴ 10

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2.0k

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ruvseq ruvg ruv

updated 6.6 years ago by davide risso ▴ 920 • written 6.7 years ago by weiwsmiling • 0

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6.3k

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RUVg ruvseq rnaseq

updated 7.2 years ago by cbcb • 0 • written 8.4 years ago by Pauly Lin ▴ 150

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1.3k

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ruvseq RUV ruvnormalize ruvg

7.2 years ago anthonycolombo60 • 0

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2.3k

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ruvseq edger ruvg removebatcheffect

updated 7.6 years ago by Aaron Lun ★ 28k • written 7.6 years ago by g.atla ▴ 10

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1.6k

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deseq2 ruvg

8.1 years ago jordan.ramilowski • 0

7 results • Page 1 of 1

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Comment: List of Deprecated Packages for Bioc3.18 by Hervé Pagès 16k

Also the source package is not available [in BioC 3.17](https://bioconductor.org/packages/3.17/CancerInSilico) which means that the package…

Answer: DelayedArray::read_sparse_block by Hervé Pagès 16k

Hi Koki, Sorry again for the slow response. `read_sparse_block()` has been around for years. It's a generic function defined in the *…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Sorry for missing that one too. When writting blocks to an HDF5 file, the `write_block()` method for HDF5RealizationSink or TENxRealizatio…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

Hi Koki, sorry for not seeing this before. > will SparseArraySeed in DelayedArray be replaced by this new sparse array format? Yes it wil…

Comment: Manual creation of qPCRset does not work by Ed Siefker ▴ 230

Thanks! This works for me.

Votes

Comment: NPARC package y-variable

Comment: List of Deprecated Packages for Bioc3.18

Answer: Manual creation of qPCRset does not work

Answer: MDS plot edgeR

A: legend with gradient in ComplexHeatmap

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