Bioconductor SRA

Showing : SRA • reset

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1.5k

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SRA DESeq2

4.3 years ago Serge • 0

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1.2k

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RNA-seq SRA reverse reads forward reads

7.2 years ago modarzi ▴ 10

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1.8k

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R fastq SRA sradb

updated 8.8 years ago by Martin Morgan 25k • written 8.8 years ago by grecoandreauni • 0

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4.5k

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sra chipseqDB fastq-dump .lite.sra

updated 8.9 years ago by James W. MacDonald 68k • written 8.9 years ago by xhe764 • 0

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1.7k

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ncbi sra search

9.6 years ago massacomgrao • 0

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4.5k

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rnaseq biocparallel workflows sra Tutorial

10.2 years ago Sean Davis 21k

6 results • Page 1 of 1

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Comment: Length of 'dimnames' [1] not equal to array extent by Francesco Silvestro • 0

Resolved the error message!

Comment: WGCNA analysis on RNAseq and proteoimcs data by sum31278 • 0

Hi sagigordon, Can you share how you performed WGCNA analysis for proteomics data? Thanks

Comment: European Bioconductor Conference 2023 planning by inadequate.peacock.iiag • 0

I once faced a dilemma similar to this when coordinating a smaller local event; despite initial hesitation, I learned invaluable skills and…

Comment: ROAST compare results with complex design by Gordon Smyth 52k

It's also worth pointing out that the syntax for `camera` and `mroast` is the same, so I wonder how OP did the earlier `camera` analysis.

Answer: ROAST compare results with complex design by James W. MacDonald 68k

You are specifying that the last column of your design should be used as the contrast. You should instead use `contrast[,1]`, which will us…

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Answer: ROAST compare results with complex design

How to account for solvent controls in DESeq2 when comparing follicular vs luteal phase?

Answer: How to account for solvent controls in DESeq2 when comparing follicular vs lutea

Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi

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