Showing : SRA • reset
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Creating a DESeqDataSet from a RangedSummarizedExperiment - where is the design parameter in RangedSummarizedExperiment
SRA DESeq2
4.7 years ago Serge • 0
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0
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1.4k
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Problem for Splitting reverse and forward reading in my RNA-seq
RNA-seq SRA reverse reads forward reads
7.7 years ago modarzi ▴ 10
2
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1
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2.0k
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Uniting SRA Data into a single file
R fastq SRA sradb
updated 9.3 years ago by 25k • written 9.3 years ago by • 0
0
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3
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4.9k
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download SRR*.lite.sra files using fastq-dump command
sra chipseqDB fastq-dump .lite.sra
updated 9.4 years ago by 68k • written 9.4 years ago by • 0
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2.0k
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Search SRA based on BioSample Attributes
ncbi sra search
10.1 years ago massacomgrao • 0
6
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1
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4.7k
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Tutorial: Orchestrating a small, parallel, RNA-seq pre-processing workflow using R
rnaseq biocparallel workflows sra Tutorial
10.7 years ago Sean Davis 21k
6 results • Page 1 of 1
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Answer: Inconsistencies between accessor functions for TxDb databases with selected seql by a2a2hd42aa • 0
Technical inconsistencies in database accessors can disrupt your workflow, but finding a reliable source to download online mobile games sh…
Comment: Can sample-level weights be used when analysing GSVA scores in limma? by A.Barden ▴ 20
Thanks both for this useful information.
Comment: Reproducibility of code in various Bioconductor versions by Gordon Smyth 53k
SNPlocs.Hsapiens.dbSNP155.GRCh38 is available for download from the same location as always. It has not changed since Bioc 3.20: Presumabl…
Comment: Changing multiple display parameters of a specific exon in GeneRegionTrack by a2a2hd42aa • 0
Similarly, for structural complexity in the [He777 Game][1] APK, having precise control over every detail is what makes a high-performance …
Answer: Issue loading and downloading Bioconductor 3.22 packages after update by strawberry3 • 0
Hi, thank you all for the advice. Using James's advice, I managed to install SNPlocs.Hsapiens.dbSNP155.GRCh38, but it took almost half an …
Votes
Do I map probes to gene symbols BEFORE or AFTER differentially expressed gene analysis?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Can sample-level weights be used when analysing GSVA scores in limma?
Comment: Can sample-level weights be used when analysing GSVA scores in limma?
Answer: Issue loading and downloading Bioconductor 3.22 packages after update
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