Bioconductor Transcription

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Transcription Annotation BSgenome annotate Biostrings BSgenome Transcription Annotation

updated 17.0 years ago by Hervé Pagès 16k • written 17.0 years ago by Guido Hooiveld ★ 4.1k

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Transcription Transcription

updated 17.5 years ago by Hervé Pagès 16k • written 17.5 years ago by Hans-Ulrich Klein ▴ 330

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Transcription Biobase annotate Transcription Biobase annotate

updated 18.0 years ago by Wolfgang Huber ★ 13k • written 18.0 years ago by Al Ivens ▴ 270

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Transcription Annotation GO Transcription Annotation GO

updated 18.2 years ago by Seth Falcon ★ 7.4k • written 18.2 years ago by Mark W Kimpel ▴ 830

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Transcription Normalization GUI limma Transcription Normalization GUI limma

updated 18.4 years ago by Adrian Steward ▴ 50 • written 18.4 years ago by Gordon Smyth 53k

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Transcription Transcription

18.5 years ago Ольга Камнева ▴ 90

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Transcription biomaRt Transcription biomaRt

updated 19.0 years ago by Steffen Durinck ▴ 580 • written 19.0 years ago by J.delasHeras@ed.ac.uk ★ 1.9k

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Transcription qPCR Genetics probe affy Transcription qPCR Genetics probe affy

updated 19.1 years ago by Alberto Goldoni ▴ 360 • written 19.1 years ago by Graeme Smethurst ▴ 10

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Transcription Annotation GO hgu133a probe Transcription Annotation GO hgu133a probe

updated 21.1 years ago by John Zhang ★ 2.9k • written 21.1 years ago by Mayte Suarez-Farinas ▴ 300

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Transcription Transcription

21.2 years ago Michael Gates ▴ 40

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Transcription Microarray Transcription Microarray

updated 21.4 years ago by Jean Yee Hwa Yang ▴ 920 • written 21.4 years ago by xpzhang ▴ 90

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Transcription Cancer Transcription Cancer

updated 21.9 years ago by James W. MacDonald 68k • written 21.9 years ago by Richard Friedman ★ 2.0k

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Transcription Clustering Cancer Transcription Clustering Cancer

updated 22.4 years ago by Wolfgang Huber ★ 13k • written 22.4 years ago by Gordon Smyth 53k

113 results • Page 3 of 3

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Comment: Help with defining groups by Phinney, Brett ▴ 10

I got it working , thank you!!!

Comment: Check removeBatchEffect effectiveness by massimo • 0

I would kindly ask for additional support. When not including the design_timepoint argument in removeBatchEffect and thus keeping the inter…

Comment: Error Loading Experiment from SimBenchData Package by ksankaran • 0

Aha, that was it! The object was class Seurat, but I didn't have it installed. After installing, everything works as expected.

Comment: Streamlining the computing time for MiloDE p-value correction in large dataset? by ATpoint ★ 5.0k

Is a method that is so computationally expensive really beneficial and necessary? You seem to have biological replication, don't you, so ps…

Answer: NA values for DESeq2 p-values and adjusted p-values using large sample sizes by ATpoint ★ 5.0k

Outliers without replacement, independent filtering or all-zero counts for that gene. That's the three options that trigger NAs https://bio…

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Comment: Check removeBatchEffect effectiveness

Gene expression associated with continuous (quantitative) traits (Limma/edgeR/correlation)

Answer: Error Loading Experiment from SimBenchData Package

Comment: incomplete imputation of missing values with LEA impute() function

Answer: Expected memory usage for analyzing large single-cell seq datasets (> 450,000 ce

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