Bioconductor Vranges

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somaticsignatures vranges readvcfasvranges

7.3 years ago guillaume.dachy • 0

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2.4k

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variantannotation vcf readvcf vranges

updated 7.5 years ago by Michael Lawrence ★ 11k • written 7.5 years ago by david.mas • 0

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1.7k

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variantannotation VRanges R Rle

updated 7.5 years ago by Valerie Obenchain ★ 6.8k • written 7.5 years ago by Jayendra Shinde • 0

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somaticsignatures somaticsignatures package readvcfasvranges vranges

8.4 years ago • updated 8.3 years ago guillaume.dachy • 0

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vranges vcf to vranges

9.0 years ago Bogdan ▴ 670

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somaticsignatures vranges

updated 9.5 years ago by Julian Gehring ★ 1.3k • written 9.5 years ago by arsala521 ▴ 10

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granges vranges readvcfasvranges somaticsignatures

updated 9.7 years ago by Michael Lawrence ★ 11k • written 9.7 years ago by jpluta26 • 0

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SomaticSignatures mutationContext VRanges

updated 10.3 years ago by Julian Gehring ★ 1.3k • written 10.3 years ago by tesa.severson ▴ 10

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variantannotation vranges readvcf readvcfasvranges metadata

10.8 years ago summerela • 0

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4.0k

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variantannotation granges DNAStringSetList findoverlaps Vranges

10.8 years ago summerela • 0

10 results • Page 1 of 1

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Comment: EuroBioC2026 abstract submission is open! by TikTsokaasocissalpc • 0

Submitting abstracts for EuroBioC2026 can be exciting but organizing ideas is key. A Random Word Generator [visit][1] can help create uniqu…

Comment: DESeq2 on non-RNASeq counts data by TikTsokaasocissalpc • 0

In data analysis, behavior differences based on data type are common. Similarly, Best EDI Software adapts to non-standard transaction volum…

Comment: blockwiseModule crashes in the end and doesn't generate modules by gexose2839 • 0

Sounds good. @[time][1] [1]: https://timeduration.github.io

Comment: PFAM formats changed - is it still possible to use this with ISA? by TikTsokaasocissalpc • 0

For mobile gaming enthusiasts, 3 Patti Lucky offers a seamless experience, unlike the frustration Harris faced with incompatible PFAM resul…

Answer: segfault in edgeR glmQLFit by Gordon Smyth 53k

Dear Mark, Thank you for providing a reproducible example. I confirm that I can reproduce the segfault myself on my own computer. The prob…

Votes

C: DESeq2 Following RSEM

Upcoming Ensembl API and data access changes - new blog post available

Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?

Answer: Large logFC but somewhat high FDR

Comment: upstream git branches of bioc-release

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