Bioconductor Vranges

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somaticsignatures vranges readvcfasvranges

6.5 years ago guillaume.dachy • 0

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2.1k

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variantannotation vcf readvcf vranges

updated 6.7 years ago by Michael Lawrence ★ 11k • written 6.7 years ago by david.mas • 0

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1.4k

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variantannotation VRanges R Rle

updated 6.7 years ago by Valerie Obenchain ★ 6.8k • written 6.7 years ago by Jayendra Shinde • 0

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2.0k

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somaticsignatures somaticsignatures package readvcfasvranges vranges

7.6 years ago • updated 7.5 years ago guillaume.dachy • 0

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1.6k

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vranges vcf to vranges

8.2 years ago Bogdan ▴ 670

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2.1k

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somaticsignatures vranges

updated 8.7 years ago by Julian Gehring ★ 1.3k • written 8.7 years ago by arsala521 ▴ 10

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1.8k

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granges vranges readvcfasvranges somaticsignatures

updated 9.0 years ago by Michael Lawrence ★ 11k • written 9.0 years ago by jpluta26 • 0

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2.5k

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SomaticSignatures mutationContext VRanges

updated 9.5 years ago by Julian Gehring ★ 1.3k • written 9.5 years ago by tesa.severson ▴ 10

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2.7k

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variantannotation vranges readvcf readvcfasvranges metadata

10.1 years ago summerela • 0

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3.5k

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variantannotation granges DNAStringSetList findoverlaps Vranges

10.1 years ago summerela • 0

10 results • Page 1 of 1

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Comment: Removing UTR from GTF for gene quantification by ATpoint ★ 4.7k

Consider asking at biostars or bioinformatics reddit, since this is not directly related to a Bioconductor problem. Anyway, a couple of th…

Comment: Combining RNAseq and microarray data using edgeR/limma-voom by Hoover • 0

I got it! ([Drift Boss][1]) [1]: https://driftbossgame.co

Comment: Limma with covariates by Hoover • 0

Thanks for the suggestion James ([geometry dash meltdown][1]) [1]: https://geometry-dashmeltdown.co

Comment: Issue when attempting to use output from DECIPHER IDtaxa (pr2 V5) with dada2/phy by Erik Wright ▴ 150

IDTAXA classification can be performed from training sets with or without assigned ranks. In this case it looks like `LearnTaxa()` was not …

Comment: Understanding "gene ratio" when using plotEnrich(c()) by California Business Journal • 0

Find the latest [California business articles][1] on California Business Journal, covering success stories, market trends, and expert insig…

Votes

Answer: Differential expression of proteins using somascan data

Answer: Surprising behavior for DEXseq dispersion estimate plot?

Answer: Handle zero effective gene length when tximport RSEM results

Handle zero effective gene length when tximport RSEM results

How to remove genes with 0 counts in tximport?

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Popular Question to Lluís Revilla Sancho ▴ 760