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airway
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1
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3.7k
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airway package not compatible with R version 4.1.2 (2021-11-01)
airway
updated 4.0 years ago by
ATpoint
★ 5.0k • written 4.0 years ago by
j.jacob1
• 0
0
votes
1
reply
1.1k
views
RNA-Seq Workflow Vignette - library(airway) Missing "quants" directory
RNASeq
DESeq2
airway
updated 4.1 years ago by
Michael Love
43k • written 4.1 years ago by
dmbergau
• 0
5
votes
8
replies
1.7k
views
Tibble error when installing bioconductor "airways"
airway
5.8 years ago
brest
• 0
0
votes
2
replies
1.8k
views
Is there a data package containing complex RNA-Seq data?
RNAseqdataset
airway
deseq2
rangedsummarizedexperiment
rnaseqgene
updated 7.9 years ago by
mario.zanfardino
▴ 160 • written 7.9 years ago by
ap3637
• 0
1
vote
5
replies
4.4k
views
installation of "airway" had non-zero exit status
airway
updated 9.0 years ago by
Martin Morgan
25k • written 9.0 years ago by
liyi983923
• 0
1
vote
3
replies
6.2k
views
package ‘airway’ is not available (for R version 3.2.2)
airway
updated 10.2 years ago by
Dan Tenenbaum
★ 8.2k • written 10.2 years ago by
jmmonroykuhn
• 0
0
votes
1
reply
1.4k
views
error in bioc2015rnaseq tutorial
deseq2
airway
updated 10.4 years ago by
Michael Love
43k • written 10.4 years ago by
pcantalupo
▴ 10
7 results • Page
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Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
Gordon Smyth
53k
My apologies, I forgot that `design.group` is not included in the final matrix, because the baseline group effects are already captured by …
Answer: Bile acid analysis with limpa
by
Gordon Smyth
53k
I am not familiar with targeted HPLC-MS and I don't know what you mean by "peak areas". If it produces standard format mass spec data from …
Comment: How to convert .raw data for use in xcms
by
TikTsossa33ssalpc
• 0
It sounds like your mzML conversion has a CV term that XCMS doesn t recognize, which often happens with newer vendor formats or outdated ms…
Comment: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace
by
TikTsossa33ssalpc
• 0
To calculate event numbers for boolean combinations in flow cytometry, you should use a logic gating tool or a script that processes popula…
Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2
by
chp265
• 0
Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…
Votes
A: DESeq2: Is it possible to convert read counts to expression values via TPM and r
A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen
Comment: limpa analysis advice
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
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