Showing : airway • reset
1
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airway package not compatible with R version 4.1.2 (2021-11-01)
airway
updated 2.8 years ago by ★ 4.5k • written 2.8 years ago by • 0
0
votes
1
reply
803
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RNA-Seq Workflow Vignette - library(airway) Missing "quants" directory
RNASeq DESeq2 airway
updated 2.9 years ago by 42k • written 2.9 years ago by • 0
5
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8
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1.3k
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Tibble error when installing bioconductor "airways"
airway
4.6 years ago brest • 0
0
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2
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1.5k
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Is there a data package containing complex RNA-Seq data?
RNAseqdataset airway deseq2 rangedsummarizedexperiment rnaseqgene
updated 6.7 years ago by ▴ 160 • written 6.7 years ago by • 0
1
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5
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4.0k
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installation of "airway" had non-zero exit status
airway
updated 7.8 years ago by 25k • written 7.8 years ago by • 0
1
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3
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5.8k
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package ‘airway’ is not available (for R version 3.2.2)
airway
updated 9.0 years ago by ★ 8.2k • written 9.0 years ago by • 0
0
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1
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1.2k
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error in bioc2015rnaseq tutorial
deseq2 airway
updated 9.2 years ago by 42k • written 9.2 years ago by ▴ 10
7 results • Page 1 of 1
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Comment: [How to construct a model.matrix ] by kyj2226 • 0
Thanks to you, I learn a lot. Many thanks, Yujin.
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0
thank you for your advice, I posted separate post.
Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k
Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…
Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k
DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…
Answer: [How to construct a model.matrix ] by Gordon Smyth 51k
> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…
Votes
Answer: [How to construct a model.matrix ]
C: DESeq2 baseMean values for each sample
C: DESeq2 baseMean values for each sample
Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta
A: Some questions for remove batch effect by using mnnCorrect
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