Biostar Arrays

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348

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limma arrays genefilter

updated 8 months ago by James W. MacDonald 62k • written 8 months ago by jacorvar ▴ 40

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874

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Microarray arrays limma MicroarrayData

updated 21 months ago by Gordon Smyth 47k • written 21 months ago by Emma • 0

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605

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limma Microarray MicroarrayData arrays

updated 22 months ago by Kevin Blighe 3.8k • written 22 months ago by Emma • 0

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555

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ArrayExpress limma arrays

22 months ago RMP87 • 0

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977

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minfiDataEPIC arrays limma minfi Epigenetics

updated 2.3 years ago by Gordon Smyth 47k • written 2.3 years ago by Jeff ▴ 20

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2.5k

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array R rhdf5 arrays h5

updated 8.1 years ago by Nathaniel Hayden ▴ 180 • written 8.1 years ago by FabioF • 0

6 results • Page 1 of 1

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Comment: Duplicate row.names when building SummarizedExperiment with make_se in DEP by Simran • 0

did you get your answer? I've been using DEP several times but the error only shows up now for some reason?

Comment: Does DiffBind make consensus peaks sets for samples from a given condition (e.g. by tahir.msajid • 0

Got it. Thank you Rory.

Comment: RUVSeq and DESeq2 -- all variables in design formula must be columns in colData by garbuzov • 0

Thanks! That was it... why did I think they were equivalent?

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

Thank you @gordon-smyth for your patience and time. I see that I need to reread carefully the user guide so I could follow your advice.

Comment: Time-course, comparison of two groups by boczniak767 ▴ 720

> Do you have actually have data or is this is a theoretical exercise? A the moment I don't have data from my principal investigator's exp…

Votes

Calculation of module membership in WGCNA

A: converting ensembl transcript ID to ensemble gene: problem & missing values

Comment: From a ENST to ENSG

Answer: Help with Error in DiffBind

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Teacher to Mike Smith ★ 6.0k