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aucell
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gene Set with high AUC score but no cells assigned to cell type
AUCell
written 4 weeks ago by
gogeni5529
• 0
0
votes
1
reply
521
views
Intepretation of results
AUCell
written 6 months ago by
jasperwong_123
• 0
2
votes
3
replies
1.8k
views
Applicability of AUCell to bulk RNA-seq
AUCell
AUcell
2.3 years ago • updated 2.2 years ago
Lucy
▴ 60
3
votes
1
reply
990
views
Should I set a seed prior to running AUCell?
AUCell
updated 3.0 years ago by
ATpoint
★ 5.0k • written 3.0 years ago by
Lucy
▴ 60
1
vote
5
replies
2.3k
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RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 7.4 years ago by
Martin Morgan
25k • written 7.4 years ago by
jka8119
▴ 10
2
votes
4
replies
1.9k
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 7.4 years ago by
sara.aibar
▴ 10 • written 7.4 years ago by
Xingyu
• 0
6 results • Page
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Comment: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
You sure will find online tutorials on regression models / machine learning classifiers. The support site is for help with Bioconductor. Ch…
Comment: Using DESeq2 for age prediction
by
picasa1983
• 0
Thanks ! Do you have any idea how to do that ?
Answer: Using DESeq2 for age prediction
by
ATpoint
★ 5.0k
The package has no such inbuilt function but you are free to use the vst (or any normalized) counts to train a regression model or classifi…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
James W. MacDonald
68k
Aaron already answered your question. If you have an HDF5 file, it will be read in as a `TENxMatrix` object, which isn't actually read in -…
Comment: Best practice for handling large data (matrix with >2^31-1 non-zero elements) in
by
dan.gatti
• 0
Very strange. We have the same package versions. I tried adding the mtx.class, type, and delayed arguments, but it's still making the coun…
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A: Multi-level experiments in Limma
Answer: Should voomWithQualityWeights still be used when the sample-specific weights var
Answer: DESeq2 for candidate gene analysis
DESeq2 for candidate gene analysis
Answer: DESeq2 for candidate gene analysis
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