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aucell
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1
vote
3
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599
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gene Set with high AUC score but no cells assigned to cell type
AUCell
3 months ago • updated 7 weeks ago
gogeni5529
• 0
0
votes
1
reply
610
views
Intepretation of results
AUCell
written 9 months ago by
jasperwong_123
• 0
2
votes
3
replies
2.0k
views
Applicability of AUCell to bulk RNA-seq
AUCell
AUcell
2.5 years ago • updated 2.4 years ago
Lucy
▴ 60
3
votes
1
reply
1.2k
views
Should I set a seed prior to running AUCell?
AUCell
updated 3.2 years ago by
ATpoint
★ 5.0k • written 3.2 years ago by
Lucy
▴ 60
1
vote
5
replies
2.4k
views
RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 7.6 years ago by
Martin Morgan
25k • written 7.6 years ago by
jka8119
▴ 10
2
votes
4
replies
2.0k
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 7.6 years ago by
sara.aibar
▴ 10 • written 7.6 years ago by
Xingyu
• 0
6 results • Page
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Comment: Pairwise comparison of multiple groups with different base
by
ja569116
• 0
Hi @mikelove I have a similar situation, and I feel that I have interpreted the results in the wrong way. In my case I would like to identi…
Comment: Are individual-mouse-based statistics possible in CellChat?
by
TikTsossakaas33ocissalpc
• 0
Questions about comparing groups and statistical significance highlight how data driven thinking matters across fields. In online mobile ga…
Comment: DESeq2 - how many surrogate variables from svaseq, use of lfcshrink
by
ja569116
• 0
Hi @atpoint Thanks for the information. Could you please expand on when to use adjusted p-values vs nominal p-values. My understanding was …
Answer: limpa analysis advice
by
Gordon Smyth
53k
It is actually very hard to estimate the DPC from observed data, because the curve is function of unobserved intensities rather than a func…
Answer: When to use edgeR or limma
by
Gordon Smyth
53k
The short answer is that we generally prefer edgeR for applications with lots of small counts and limma for complex designs with random eff…
Votes
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
Answer: When to use edgeR or limma
A: deseq2 - paired samples in 2 sequencing types with very different library sizes
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