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aucell
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1
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gene Set with high AUC score but no cells assigned to cell type
AUCell
11 weeks ago • updated 17 days ago
gogeni5529
• 0
0
votes
1
reply
580
views
Intepretation of results
AUCell
written 8 months ago by
jasperwong_123
• 0
2
votes
3
replies
1.9k
views
Applicability of AUCell to bulk RNA-seq
AUCell
AUcell
2.4 years ago • updated 2.3 years ago
Lucy
▴ 60
3
votes
1
reply
1.1k
views
Should I set a seed prior to running AUCell?
AUCell
updated 3.1 years ago by
ATpoint
★ 5.0k • written 3.1 years ago by
Lucy
▴ 60
1
vote
5
replies
2.3k
views
RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 7.5 years ago by
Martin Morgan
25k • written 7.5 years ago by
jka8119
▴ 10
2
votes
4
replies
1.9k
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 7.5 years ago by
sara.aibar
▴ 10 • written 7.5 years ago by
Xingyu
• 0
6 results • Page
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Recent ...
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Comment: p.adjust BH Question
by
TikTsoksocissalpc
• 0
Thanks for sharing your question about RMA limma analysis While working on your experiment, it s always helpful to have some background mu…
Answer: NUPOP usage
by
shepherl
4.2k
You should read the documentation in the package especially the package vignette https://bioconductor.org/packages/release/bioc/html/NuPoP.…
Comment: How can I correctly use phyloseq with Docker?
by
fnfgame
• 0
In a rocker image, this error usually means the Bioconductor install happened as root but the runtime library paths used by the shiny user …
Comment: DECIPHER DesignProbes unable to design FISH-probes
by
Erik Wright
▴ 150
Are the sequences aligned (i.e., the same width) before running `TileSeqs()`?
Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment
by
Michael Love
43k
BTW, I tested with no issue on MacOS ARM on our previous github issue.
Votes
C: DESeq2 Following RSEM
Upcoming Ensembl API and data access changes - new blog post available
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
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