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aucell
•
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1
vote
3
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917
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gene Set with high AUC score but no cells assigned to cell type
AUCell
5 months ago • updated 3 months ago
gogeni5529
• 0
0
votes
1
reply
719
views
Intepretation of results
AUCell
written 11 months ago by
jasperwong_123
• 0
2
votes
3
replies
2.1k
views
Applicability of AUCell to bulk RNA-seq
AUCell
AUcell
2.6 years ago • updated 2.5 years ago
Lucy
▴ 60
3
votes
1
reply
1.4k
views
Should I set a seed prior to running AUCell?
AUCell
updated 3.4 years ago by
ATpoint
★ 5.0k • written 3.4 years ago by
Lucy
▴ 60
1
vote
5
replies
2.4k
views
RcisTarget error with multicore processing
RcisTarget
aucell
SCENIC
updated 7.7 years ago by
Martin Morgan
25k • written 7.7 years ago by
jka8119
▴ 10
2
votes
4
replies
2.2k
views
Cannot install AUCell 1.2.2
AUCell
SCENIC
updated 7.8 years ago by
sara.aibar
▴ 10 • written 7.8 years ago by
Xingyu
• 0
6 results • Page
1 of 1
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Comment: Inclusion of non-coding portions of transcripts (UTR-regions and introns) within
by
Pat
• 0
Ill be honest, I didnt trust any of these services for a long time. Im a political science major and the pressure around writing is intense…
Comment: Question on processing compound protein groups in limpa
by
brianpeterson1210
• 0
Thank you[,][1] Appreciated! [1]: http://paint3d.org
Comment: Subsetting DDS object for individual conditions over time
by
A
▴ 60
Hi @atpoint Thank you for the quick reply! and this makes sense! I will confirm with a corr to see how the SFs differ but also how DE dif…
Answer: Subsetting DDS object for individual conditions over time
by
ATpoint
★ 5.0k
It would surprise my quite a bit if the size factors would differ notably between subset or not. I would always try to keep the size factor…
Comment: GSEA error
by
Adithi
• 0
Thank you so much. That makes perfect sense to me. I will work on this.
Votes
Answer: RNA Seq using Lrt
Answer: DESeq2 LRT Reduced Formula
Answer: DESeq2: LRT or WALD guidance
Answer: GSEA error
Answer: OrgDb for maize
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