Bioconductor Aucell

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AUCell AUcell

10 months ago • updated 9 months ago Lucy ▴ 60

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AUCell

updated 19 months ago by ATpoint ★ 4.1k • written 19 months ago by Lucy ▴ 60

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RcisTarget aucell SCENIC

updated 5.9 years ago by Martin Morgan 25k • written 5.9 years ago by jka8119 ▴ 10

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AUCell SCENIC

updated 6.0 years ago by sara.aibar ▴ 10 • written 6.0 years ago by Xingyu • 0

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Answer: Errors in chromosome annotation-biomaRt by James W. MacDonald 65k

If you are just using HGNC symbols for the lookup, and you are trying to get NCBI IDs, then I wouldn't use `biomaRt` because it's based on …

Comment: Help with ENmix readidat by James W. MacDonald 65k

Please don't add to posts from two years ago. Instead make a new post. Also, please read the help page for `readidat`. The only reason to …

Comment: LRT, more than two conditions and pairwise comparisons by James W. MacDonald 65k

In that case, probably easiest to subset to the groups being compared.

Comment: Help with ENmix readidat by minardsmitha ▴ 10

Did you figure this out? I have the same issue.

Comment: LRT, more than two conditions and pairwise comparisons by boczniak767 ▴ 720

Thank you for response, apparently I still don't know much about statistics. In fact I want to campare time-profiles [and the LRT has been …

Votes

Comment: DESeq2- Mysterious interaction suppresses DEGs

Answer: DESeq2- Mysterious interaction suppresses DEGs

Answer: Subsetting RNAseq data | voomaByGroup()

biomaRt not working - lazy table error

Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it

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