Showing : bsgenome forge • reset
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BSgenomeForge version 1.52.0, error in .TwoBits_export
bsgenome forge twobits_export bioconductor
6.3 years ago bioinagesh • 0
0
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7
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2.5k
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BSgenomeForge error in .TwoBits_export
bsgenome forge TwoBits_export
updated 8.2 years ago by 16k • written 8.2 years ago by • 0
2
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5
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3.0k
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Forge a BSgenome data package
bsgenome bsgenome forge
8.8 years ago • updated 8.4 years ago jodiera • 0
0
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3
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1.5k
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BSGenome problem with forgeBSgenomeDataPkg command
bsgenome forge
9.4 years ago pj dias ▴ 60
3
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1.6k
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CRISPRseek with (rough) Draft Genome
crisprseek grna searching bsgenome forge offtarget analysis
updated 9.5 years ago by 16k • written 9.5 years ago by • 0
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Error from BSgenome forge using .2bit file
BSgenome forge 2bit bsgnome forge 2bit file
updated 10.7 years ago by 16k • written 10.7 years ago by • 0
2
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How do I create BSgenome Bos_taurus_UMD3.1?
bsgenome forge bovine
updated 10.7 years ago by 16k • written 10.7 years ago by • 0
7 results • Page 1 of 1
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Replies
Comment: upstream git branches of bioc-release by TrentonCollier99 • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments. https://bioc-release.r-univ…
Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication? by Ahmed Salah • 0
Thank you very much! will take that into consideration
Comment: Large logFC but somewhat high FDR by JKim • 0
Thank you very much for taking the time to answer the question. I really appreciate your insights and comments.
Comment: upstream git branches of bioc-release by Jeroen ▴ 10
OK I have updated https://bioc-release.r-universe.dev accordingly. Let me know if you find version differences when mirroring binaries.
Comment: Large logFC but somewhat high FDR by Gordon Smyth 53k
I don't know what `tp1` is. The relevant histogram would be: ``` hist(fit2$p.value[,"KO_vs_WT"]) ```
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Comment: Highly similar RNA-seq samples in PCA - pooling or technical duplication?
Answer: Large logFC but somewhat high FDR
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
Comment: upstream git branches of bioc-release
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