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bsgenome forge
•
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1.6k
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BSgenomeForge version 1.52.0, error in .TwoBits_export
bsgenome forge
twobits_export
bioconductor
6.1 years ago
bioinagesh
• 0
0
votes
7
replies
2.5k
views
BSgenomeForge error in .TwoBits_export
bsgenome forge
TwoBits_export
updated 8.0 years ago by
Hervé Pagès
16k • written 8.0 years ago by
stu111538
• 0
2
votes
5
replies
2.9k
views
Forge a BSgenome data package
bsgenome
bsgenome forge
8.6 years ago • updated 8.2 years ago
jodiera
• 0
0
votes
3
replies
1.5k
views
BSGenome problem with forgeBSgenomeDataPkg command
bsgenome forge
9.2 years ago
pj dias
▴ 60
3
votes
2
replies
1.6k
views
CRISPRseek with (rough) Draft Genome
crisprseek
grna searching
bsgenome forge
offtarget analysis
updated 9.3 years ago by
Hervé Pagès
16k • written 9.3 years ago by
rajewski23
• 0
0
votes
1
reply
1.6k
views
Error from BSgenome forge using .2bit file
BSgenome forge
2bit
bsgnome forge
2bit file
updated 10.5 years ago by
Hervé Pagès
16k • written 10.5 years ago by
mbk0asis
• 0
2
votes
1
reply
1.7k
views
How do I create BSgenome Bos_taurus_UMD3.1?
bsgenome forge
bovine
updated 10.5 years ago by
Hervé Pagès
16k • written 10.5 years ago by
mbk0asis
• 0
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Answer: DiffBind - question on the use of filtered or unfiltered input data
by
vejogos850
• 0
DiffBind - question on the use of filtered or unfiltered input data is the best to deal with, and it provides us the solutions that we are …
Answer: Help with defining groups
by
Gordon Smyth
53k
Defining sample groups is separate to reading in the DIA-NN data, because the sample conditions and covariates are not necessarily coded in…
Comment: Sharing a collection of datasets in ExperimentHub
by
Peter Hickey
▴ 760
The [**scRNAseq**](https://bioconductor.org/packages/scRNAseq/) package ([source on GitHub](https://github.com/LTLA/scRNAseq)) might serve …
Comment: Using DESeq2 on single cell RNA Seq data of same cell type but different conditi
by
ReinholdGaylord99
• 0
Thank you so much! https://www.nature.com/articles/s41467-021-25960-2/ [geometry dash lite](https://geometrydashlite.online)
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
by
Gordon Smyth
53k
I'm not sure that I understand. You have a dataset that, even after pseudo-bulking, still has 6000 samples? That is surprising. Retaining …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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