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Comment: Biostrings error at retrieving protein sequences
by
James W. MacDonald
63k
It depends on what kind of whitespace it is. If the whitespace is just a space, then it will work. But if it's a tab, it won't.
```
> gsub…
Comment: Biostrings error at retrieving protein sequences
by
nromerov
•
0
If i write it like
```r
gsub(" .*", "", names(protein_sequences))
```
it will delet all the extra information if it is on the AAString…
Comment: bug in block.plsda from mixOmics?
by
Lluís Revilla Sancho
▴
720
Oh, sorry for the noise, I see that just after Bioconductor 3.16 the bug is fixed in both 3.17 and in devel. Thanks for checking.
Answer: Mixed up sample info with plotPCA
by
Michael Love
40k
I can already tell there is code you aren't showing. For example, your `pcaData` has a variable 'group' that isn't in the previous sample i…
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