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A way to find which genome builds a package supports
build
genome
16 months ago
Dmitry
• 0
0
votes
1
reply
749
views
Error in the Multiple platform build/check report for BioC 3.15
build
BuildReport
updated 2.5 years ago by
Mike Smith
★ 6.5k • written 2.5 years ago by
Meriem
• 0
1
vote
1
reply
496
views
Mac/Windows test build systems?
build
updated 2.7 years ago by
shepherl
3.9k • written 2.7 years ago by
hstern2
• 0
0
votes
0
replies
991
views
News:
Release Deadline: Passing R CMD build and R CMD check
package
build
build/check error
check
release
News
6.3 years ago
shepherl
3.9k
1
vote
3
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1.6k
views
How to access error log from build report
build
testthat
cmd check
updated 8.7 years ago by
James W. MacDonald
66k • written 8.7 years ago by
Peter
• 0
2
votes
3
replies
1.3k
views
Building a reduced BSgenome.Gallus.UCSC.galGal 4 from Bioconductor
r
build
genome
chicken-sheme
8.7 years ago
pertille
• 0
6 results • Page
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Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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