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clinicaldata
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Job:
Bioinformatics Scientist at NEXUS Personalized Health Technologies in Zurich
clinicaldata
translational
genomics
diagnostics
research
Job
7.7 years ago
Daniel Stekhoven
▴ 10
0
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0
replies
1.2k
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Possible(validated) methodology implemented in R for integrating and analyzing clinical data with gene expression data in R
data integration
clinicaldata
gene expression data
PET
8.7 years ago
svlachavas
▴ 830
0
votes
0
replies
1.6k
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Machine learning methods for feature selection and possible correlation with clinical data
machinelearning
clinicaldata
biomarkers
data integration
bioconductor
9.0 years ago
svlachavas
▴ 830
3 results • Page
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Comment: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
by
Hervé Pagès
16k
Indeed. Calculations involving floating point arithmetic are architecture-dependent, and testing the results should be done with `all.equal…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
I will follow what you suggested. I didn't use max gap anywhere. I was following statistic I and regarding the size of features, my small…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Oh I see, for the second question, I don't have a great answer. I typically think of one set as the anchor, whose ascertainment is driving …
Comment: Help with running egsea()
by
James W. MacDonald
65k
Oh, right. Ideally you would use NCBI (aka Entrez gene) IDs because they are way more likely to be unique. Gene symbols are broken down int…
Comment: Help with running egsea()
by
Chris
• 0
Thanks James! I update the question. The last question mean when we use `buildIdx()`, could we use gene symbol instead of entrezID. However…
Votes
Answer: Mac ARM64 build report for BioC 3.19 from 'kjohnson3' reporting ERROR which it
Comment: Help with running egsea()
Answer: Trim/Filter out-of-bounds GRanges
Comment: Help with running egsea()
Answer: How to save the DEXSeq results
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Michael Love
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Malcolm Cook
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Vincent J. Carey, Jr.
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