Bioconductor Cnvtools

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genomicranges cnvtools

8.3 years ago julrodr80 ▴ 30

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cnv cnvtools crlmm

9.5 years ago enriquev • 0

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copynumber cnvtools cnv copywriteR

updated 9.5 years ago by t.kuilman ▴ 170 • written 9.5 years ago by ahinsahr11 • 0

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cn.mops cnvtools tcga cnv

updated 10.2 years ago by Günter Klambauer ▴ 540 • written 10.2 years ago by vakul.mohanty ▴ 20

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cn.mops cnv cnvtools

updated 10.5 years ago by Günter Klambauer ▴ 540 • written 10.5 years ago by voksdvoks • 0

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cn.mops cnv cnvtools

updated 10.5 years ago by Martin Morgan 25k • written 10.5 years ago by bioconductor • 0

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1.2k

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CNVtools CNVtools

updated 16.0 years ago by Sean Davis 21k • written 16.0 years ago by Bryan Hepworth ▴ 30

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CNVtools CNVtools

16.2 years ago Vincent Plagnol ▴ 10

8 results • Page 1 of 1

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Answer: Are individual-mouse-based statistics possible in CellChat? by ATpoint ★ 5.0k

Not a Bioconductor package, I commented on the crosspost at https://www.biostars.org/p/9617271/

Comment: DESeq2 - how to shrink LFC for pairwise comparisons having multiple groups by ATpoint ★ 5.0k

apeglm is more cumbersome than ashr as with apeglm the coefficients need to be explicitely available in the resultsNames.So, you need to re…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Martin Morgan 25k

I see rstudioapi in the `sessionInfo()`. RStudio does not support forked ('multicore') processes. Does the BiocParallel example work when y…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Michael Love 43k

Given that this is an issue with BiocParallel on your machine and we have a minimal reproducible example, you may want to repost the issue.…

Comment: BiocParallel (and DESeq2) - wrong args for environment subassignment by Benjamin • 0

Still happening using pre-existing size factors estimating dispersions gene-wise dispersion estimates: 15 workers mean-dis…

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A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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