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News: European Bioconductor Conference 2023 planning
Europe Conference EuroBioC Events News
updated 9 days ago by • 0 • written 18 months ago by ▴ 70
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News: Call for proposals: European CarpentryConnect - 12-14 November 2024, at EMBL Heidelberg
carpentry conference
23 days ago Wolfgang Huber ★ 13k
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News: Deadline Extended - BioC2024 Abstracts and Sticker Contest - April 1st!
BioC2024 Conference Bioconductor
5 weeks ago Maria Doyle ▴ 70
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News: BioC2024 abstract submission is open!
BioC2024 Conference Bioconductor
updated 6 weeks ago by • 0 • written 10 weeks ago by ▴ 70
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News: BioC2024 registration is now open!
BioC2024 Conference Bioconductor Community
8 weeks ago Maria Doyle ▴ 70
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News: EuroBioC2024 abstract submission is open!
Conference Bioconductor EuroBioC2024
11 weeks ago Maria Doyle ▴ 70
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News: EMBO|EMBL Conference "AI and Biology"
EMBL Heidelberg AI Conference
5 months ago Wolfgang Huber ★ 13k
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News: News: BioCAsia2023 Abstract Submission & Registration Now Open!
Events BioCAsia Conference
8 months ago Maria Doyle ▴ 70
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News: Reminder: BioC2023 in-person registration closes 19th July!
Bioconductor BioC2023 Conference
9 months ago Maria Doyle ▴ 70
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News: BioC2023 abstract submission is now open!
presentation BioC2023 Conference community Bioconductor
written 14 months ago by ▴ 70
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Comment: log2FoldChange value is way too different when compared with counts(dds) by Michael Love 41k
But just to be clear, this is not the same as regressing out batch from the VST (approx log transformed): ``` limma::removeBatchEffect(cou…
Comment: log2FoldChange value is way too different when compared with counts(dds) by HAK • 0
Thank you for the explanation, probably my brain just needed to accumulate enough info to understand what you are saying, but I finally got…
Answer: Getting Error in hclust(d, method = method): NA/NaN/Inf in foreign function call by ATpoint ★ 4.1k
Here the error probably means that you habe genes where expression scross all samples is the same. Rowscaling is value minus mean divided b…
Comment: Store output of matchPWM() by James W. MacDonald 65k
Here's a self contained reproducible example, using part of the example in `?matchPWM` ``` > library(Biostrings) > data(HNF4alpha) > libr…
Comment: DEseq2 coefficient by JKim • 0
Hi Dr. Love, I'm sorry to ask another question to my old post. If the design isn't balanced, the interpretation of coefficients will be…
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SPIA plotP giving error
Answer: Fold change calculation in Diffbind vs. DESEQ2?
C: How to establish a subset from TxDb.Hsapiens.UCSC.hg38.knownGene DB
C: Extremely big genes in annotation TxDb packages
Make custom Txdb class objects from Txdb
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Scholar to James W. MacDonald 65k
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