Bioconductor Conumee

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Conu conumee

updated 3 months ago by Simon • 0 • written 4 months ago by idatta1 • 0

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442

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conumee

updated 4 months ago by idatta1 • 0 • written 5 months ago by Maximus • 0

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MethylationEPICv2.0 conumee

updated 3 months ago by Simon • 0 • written 20 months ago by luca.s ▴ 50

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907

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IlluminaHumanMethylationEPICanno.ilm10b2.hg19 conumee

updated 3.3 years ago by James W. MacDonald 67k • written 3.3 years ago by diego.bardiaux • 0

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IlluminaHumanMethylationEPICmanifest minfi conumee

updated 3.5 years ago by volker hovestadt ▴ 40 • written 3.6 years ago by theresa.walder • 0

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conumee

3.6 years ago melpag • 0

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conumee CNV 450K

6.8 years ago bird.of.clockwise • 0

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conumee

updated 10 months ago by Mingkee • 0 • written 7.4 years ago by yura.grabovska ▴ 30

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Comment: [How to construct a model.matrix ] by kyj2226 • 0

Thanks to you, I learn a lot. Many thanks, Yujin.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by rania.alanany • 0

thank you for your advice, I posted separate post.

Comment: How to extract phastcons score for all protein coding genes and lncRNAs using Ge by Robert Castelo ★ 3.4k

Hi, this is a long comment thread on 4-year old post, please open a new post with you question. To increase the odds of getting useful answ…

Answer: DESeq2 rerun returns different results by ATpoint ★ 4.5k

DESeq2 is deterministic if you use same input, code and software versions. Make sure to version-control your environment by at least tracki…

Answer: [How to construct a model.matrix ] by Gordon Smyth 51k

> Initially, I simply used > `lm(Epigenetic_age ~ Age_group + Age + Sex + PC1 + PC2 + PC3 + PC4 + PC5 + B + CD4T + CD8T + Mono + NK + Neutr…

Votes

Answer: [How to construct a model.matrix ]

C: DESeq2 baseMean values for each sample

Comment: ColData and ERROR: rows did not converge in beta, labelled in mcols(object)$beta

A: Some questions for remove batch effect by using mnnCorrect

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