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curl
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0
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530
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SSL connect error in e.g. pathview from R version 4 in Windows 10
pathview
SSL
curl
9 months ago
Matthias
• 0
1
vote
1
reply
1.5k
views
Error in curl; timeout when using biomaRt
biomaRt
curl
timeout
getBM
Bioconductor
updated 2.7 years ago by
swbarnes2
★ 1.3k • written 2.7 years ago by
nlin0907
• 0
1
vote
8
replies
9.2k
views
BioMart: curl option when using getBM in loop
curl
biomart
getBM
Tutorial
updated 4.1 years ago by
James W. MacDonald
65k • written 4.1 years ago by
Ni-Ar
▴ 10
1
vote
5
replies
2.2k
views
Curl error on ensembl biomaRt access
biomaRt
curl
4.6 years ago
fca.collin
• 0
0
votes
5
replies
2.6k
views
getBM in loop
biomart
ensembl
curl
updated 6.3 years ago by
Mike Smith
★ 6.5k • written 6.4 years ago by
Tiphaine Martin
▴ 40
4
votes
3
replies
1.9k
views
Error installing AnnotationHub on Fedora
Annotationhub
curl
httr
fedora
updated 8.0 years ago by
anastazie.d
▴ 30 • written 8.7 years ago by
barashe
▴ 10
6 results • Page
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Comment: package goseq seems to be not available on the latest version of R
by
Patrycja
▴ 20
limma package also isn't available.Is there any information when these packages will be available?
Comment: Why does GSEA on edgeR results for randomized samples give highly significant p-
by
Chris
• 0
Thanks Gordon for the advice! I ran fgsea, gsva and camera(), the most significant pathways are different. For the purpose of finding pathw…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
41k
Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…
Comment: DNAString: Standard checksum function?
by
Henrik Bengtsson
★ 2.4k
For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…
Comment: fgsea significant result
by
Chris
• 0
Thanks ATpoint! Setting a fixed seed can reproduce the same result. However, if someone else analyze the same data with different seed, the…
Votes
Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-
Handling multiple differential expression comparisons
Answer: fgsea significant result
Answer: fgsea significant result
package goseq seems to be not available on the latest version of R
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