Bioconductor Customcdf

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5.6k

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oligo customcdf HTA frma

updated 8.6 years ago by James W. MacDonald 65k • written 8.6 years ago by sanj ▴ 20

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5.2k

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affy oligo customcdf

9.4 years ago • updated 9.1 years ago rishi.dasroy ▴ 20

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3.2k

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customcdf affymetrix microarrays hgu133plus2 affy

6.3 years ago rahil ▴ 30

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2.5k

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microarray oligo cdf customcdf

updated 8.4 years ago by Guido Hooiveld ★ 3.9k • written 8.4 years ago by Nathaniel ▴ 20

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2.5k

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hta customcdf

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by pbachali ▴ 50

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1.9k

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sva ComBat customcdf affymetrix microarrays limma

8.3 years ago svlachavas ▴ 830

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1.7k

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oligo pdinfobuilder pd.mogene.1.1.st customcdf

updated 7.6 years ago by James W. MacDonald 65k • written 8.1 years ago by Guido Hooiveld ★ 3.9k

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1.6k

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oligo brainarray rma customcdf

updated 7.2 years ago by James W. MacDonald 65k • written 7.2 years ago by lcordeiro • 0

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1.2k

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justrma customCDF segfault

updated 5.3 years ago by Daniel ▴ 10 • written 8.5 years ago by maria.lehtivaara • 0

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1.1k

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Annotation GO CustomCDF cdf gcrma Annotation GO CustomCDF cdf gcrma

updated 14.4 years ago by James W. MacDonald 65k • written 14.4 years ago by Yair Benita ▴ 80

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950

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customcdf R microarray

updated 7.3 years ago by James W. MacDonald 65k • written 7.3 years ago by 12021560-002 • 0

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889

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gcrma CustomCDF Affyhgu133aExpr limma affy

updated 12 months ago by James W. MacDonald 65k • written 12 months ago by Pratik Mehta ▴ 10

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844

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customcdf

updated 7.3 years ago by James W. MacDonald 65k • written 7.3 years ago by 12021560-002 • 0

13 results • Page 1 of 1

Recent ...

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Comment: Timecourse RNASeq analysis by Aurora • 0

I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…

Comment: Once again a "Model matrix not full rank" by arfranco ▴ 130

But.. How to run a temporal assay?

Comment: Deseq2 and Normalization of RNA sequencing data by kcarey • 0

Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …

Answer: NEED FOR NESSASORY HELP by Gordon Smyth 50k

Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…

Answer: Gene-by-sample covariates in limma by Gordon Smyth 50k

Your first method would be valid if, instead of taking ratios, you instead used the differences between the log-transformed 13C and 12C int…

Votes

Bioconductor 3.19 is Released!

A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

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