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cytofkit
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2
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4
replies
2.8k
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Exporting FCS from FlowJo for flowCore & cytofkit analysis
flowcore
flow cytometry
cytofkit
updated 6.2 years ago by
SamGG
▴ 350 • written 6.2 years ago by
vsmuir
▴ 10
2
votes
2
replies
1.3k
views
Cytofkit - Trouble with writing files after performing the analysis
cytofkit
cytof
write.csv
output
updated 7.5 years ago by
chen_hao
▴ 30 • written 7.5 years ago by
cjackson13
• 0
1
vote
5
replies
1.9k
views
merging issue cytofkit
cytofkit
updated 8.0 years ago by
chen_hao
▴ 30 • written 8.0 years ago by
margherita.coccia
• 0
1
vote
5
replies
1.8k
views
Is there a way to use cytofkit on R version 3.6.3?
cytofkit
updated 4.2 years ago by
Martin Morgan
25k • written 4.2 years ago by
Mari
▴ 10
0
votes
0
replies
1.4k
views
Cytofkit package R: Error in readRDS(pfile)
cytofkit
R
7.2 years ago
anouk
• 0
0
votes
0
replies
1.3k
views
merging issue cytofkit
cytofkit
8.0 years ago
margherita.coccia
• 0
0
votes
4
replies
1.7k
views
Error when launching shiny app in cytofkit
cytofkit
updated 7.9 years ago by
chen_hao
▴ 30 • written 7.9 years ago by
crysis405
▴ 10
0
votes
0
replies
602
views
CyTOFkit error in flow cytometry data analysis
cytofkit
6.1 years ago
monali
• 0
8 results • Page
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Recent ...
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Comment: Assist me in determining whether the analysis process using the limma package ha
by
SSSJec
• 0
Thanks for your reply. I understand the principle of adjusted P-values, but I still want to address that issue. The description of the G…
Comment: Why p value inconsistent when using different number of pathway score?
by
Gordon Smyth
50k
Just a note that fgsea is not classical GSEA. The classical GSEA as described in the Subramanian paper and other papers from the Broad Inst…
Comment: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
Chris
• 0
Thank you! The resource I use may mispresent the requirement input of fgsea.
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
by
alserg
▴ 260
fgsea doesn't require the presence of deferentially expressed genes, it takes as the input the differential expression-based ranking of all…
Comment: Why p value inconsistent when using different number of pathway score?
by
Chris
• 0
Thanks Robert for an educative response!
Votes
Answer: Improving the design matrices vignette in RNAseq123
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Answer: Perform gene set enrichment analysis using fgsea on two conditions that don't ha
Comment: DESeq2: Contrast for two conditions combined versus one condition (A+B_vs_C)
Comment: Why p value inconsistent when using different number of pathway score?
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