Showing : cytof • reset
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flow cytometry differential expression through time
cytofWorkflow cytof diffcyt
4.3 years ago achaillon • 0
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Error from FlowSom to Cytofast
Cytofast FlowSom CyTOF fcs files
4.6 years ago domenico.somma • 0
1
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5
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1.4k
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CyTOF Differential Abundance Analysis using DESeq2
deseq2 mass cytometry CyTOF
updated 4.6 years ago by 43k • written 4.6 years ago by ▴ 280
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836
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Concatenating different runs from the same pool of barcoded CyTOF samples
batch effect cytof
5.1 years ago mikhael.manurung ▴ 280
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6
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Re: Cydar. Can I Normalize CyTOF data with just one FCS file/batch and if so, which normalization mode is recommended?
Cydar CyTOF normalization
updated 5.6 years ago by ★ 28k • written 5.6 years ago by • 0
2
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4
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1.3k
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Cydar's countCells tolerance parameter for arcsinh-transformed data
cydar CyTOF
updated 6.2 years ago by ★ 28k • written 6.2 years ago by ▴ 280
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2
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1.6k
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Cytofkit - Trouble with writing files after performing the analysis
cytofkit cytof write.csv output
updated 8.5 years ago by ▴ 30 • written 8.5 years ago by • 0
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Errors when reading CyToF flowSet into flowCore
flowCore flowcore CyToF Rtsne
updated 9.7 years ago by ★ 1.3k • written 9.7 years ago by ▴ 10
8 results • Page 1 of 1
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Comment: Intepretation of results by Tom • 0
[Locksmith Wombwell][1] I have been interested in using AUCell as a way to determine significantly enriched pathways in my single cell spat…
Comment: Gene Ontology (GO) Analysis by Tom • 0
[Locksmith near me][1] Hello, I'm learning about Gene Ontology analysis. I'm trying to understand the difference between the hyperGTest fun…
Comment: DiffBind; Error: No sites have activity greater than filter value by etiennedanis • 0
Same issue here as well. This is very weird because I never had this issue before. I started observing this issue with a new ATAC-seq da…
Comment: GSEA preranked analysis downstream of DEseq2 by Ajay • 0
`logFC * -log10(pval)` seems to be the pi-score proposed in this [paper][1] [1]: https://pmc.ncbi.nlm.nih.gov/articles/PMC3957066/
Comment: error in ChAMP loading file by janwilseo • 0
Any update on this post? I also had an issue with this. [erosion control](https://charlestonhydroseeding.com/)
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Answer: DiffBind; Error: No sites have activity greater than filter value
DiffBind; Error: No sites have activity greater than filter value
remove X and Y chromosome genes in RNA-seq data using DESeq2 pipeline
How to remove X & Y chromosome genes from RNAseq data
Is it advisable to remove X and Y chromosome genes in mouse bulk RNA-seq data at the level of the count matrix?
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