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dba
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DBA Error in DiffBind - How to format sampleSheet
DBA
R
DifferentialPeakCalling
2.4 years ago
opheevallee
• 0
0
votes
1
reply
1.3k
views
DiffBind dba error
DiffBind
dba
R
error
updated 4.7 years ago by
Rory Stark
★ 5.2k • written 4.9 years ago by
annika-helverson
• 0
3
votes
3
replies
4.1k
views
Error "if (is.na(peaks)) { : argument is of length zero " in DiffBind
diffbind
chipseq
peaks
dba
is.na
6.1 years ago
maria.kondili
▴ 10
0
votes
0
replies
1.1k
views
How to call "DBA_CONDITION" for mutiple conditions and How to control GLM program
cancer
deseq2
edger
CONDITIONS
DBA
6.3 years ago
arcucamila
• 0
3
votes
7
replies
2.0k
views
dba.count with pre-defined regions
dba.count
dba
chipseq
diffbind
updated 6.4 years ago by
Rory Stark
★ 5.2k • written 6.4 years ago by
sylvia
▴ 10
0
votes
1
reply
1.2k
views
can't find function "dba" in DiffBind
DiffBind
dba
package installation
7.5 years ago
rebecca.spokony
• 0
1
vote
16
replies
3.7k
views
Error: could not find function "dba"
software error
diffbind
dba
7.5 years ago
mmarins
• 0
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Comment: Problem finding certain variables when importing a public database GSE73103
by
Guido Hooiveld
★ 3.9k
FWIW: when I would like to make use of publicly available data, I always use the website to explore which metadata is submitted to GEO (and…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
This is `blockLength=200000`, and providing `seg=seg`? It's alright that it's not identical. In the bootstrapped data, you will now have l…
Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Poonam
• 0
Thank you, Michael. I used the script shared by you. The genomic distribution of the original and null loci looks like non-stationary. Plea…
Comment: ChAMP installation issue
by
shepherl
3.9k
Without showing the commands you tried and the full output including error it is impossible to help. Please provide additional information…
Answer: Gene set enrichment analysis
by
Guido Hooiveld
★ 3.9k
No, that is not possible. The idea of gene set enrichment analysis (GSEA) is that it checks which gene sets (pathways, GO categories) are e…
Votes
A: DEXSeq time course design
using variable in design formula
differential expression for Single-cell RNAseq data using edgeR
Why p value inconsistent when using different number of pathway score?
Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu
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