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distanceToNearest
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2
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distanceToNearest
rtracklayer
ranges
distanceToNearest
4 months ago
robjohn70000
• 0
2
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806
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SOLVED. finding distance to nearest neighbour (non-self) within a list in GenomicRanges
GenomicRanges
GenomicFeatures
grange
distanceToNearest
R
4.6 years ago
rmash
▴ 20
0
votes
1
reply
1.1k
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GenomicRanges distanceToNearest: trouble replicating snp-gene mapping from older version
GenomicRanges
distancetonearest
strandedness
updated 6.1 years ago by
Valerie Obenchain
★ 6.8k • written 6.1 years ago by
shraddha.pai
• 0
2
votes
5
replies
1.2k
views
DistanceToNearest Not giving nearest Range
GRanges
distancetonearest
updated 6.5 years ago by
Julie Zhu
★ 4.3k • written 6.5 years ago by
chitsazanalex
▴ 10
0
votes
5
replies
4.5k
views
Unable to find an inherited method for function distanceToNearest for signature GRanges
chipenrich
granges
distancetonearest
function
dataframe
6.5 years ago
rbronste
▴ 60
1
vote
14
replies
1.9k
views
DistanceToNearest() error: 'nLnode' and 'nRnode' must be single integers
genomicranges
DistanceToNearest
updated 7.7 years ago by
Valerie Obenchain
★ 6.8k • written 7.7 years ago by
roladali
▴ 20
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Comment: Volcano plot of scRNA-seq data not "centered"
by
ATpoint
★ 4.2k
My comment was generic. If your experiment causes drastic shifts then the situation might be different. The advise is the same: Try to use …
Comment: conumee with Infinium MethylationEPIC v2.0
by
Maximus
• 0
Hi Sole, If there is a combined mixture of MSet of 450K, EPIC and EPICv2, how should I create an annotation object? I tried to create anno…
Comment: Volcano plot of scRNA-seq data not "centered"
by
tjl
• 0
Thank you both. The code is below, simplified a bit for simplicity. ATpoint, your suggestion re: the top 20% of genes by baseMean makes me …
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
Wait a minute. The `oligo` package is *supposed to* be using `zlibbioc`, but apparently it is not. I get the same thing as you do, where it…
Comment: Cannot install oligo on Fedora
by
James W. MacDonald
66k
There is the `zlibbioc` package that provides the headers for zlib 1.2.5, that I think you should be able to use, although that would requi…
Votes
DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol
DESeq2 swap ensembl gene id rownames with gene symbol column
A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge
DESeq2: add annotations (from data frame) to DESeqDataSet
Add new columns to DESeqResults from text file by matching rownames.
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