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enrichGO
•
reset
2
votes
5
replies
3.2k
views
How to use EnrichGo of Cluster Profiler
EnrichGO
clusterProfiler
written 3.3 years ago by
Carolina
• 0
4
votes
2
replies
6.7k
views
How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
clusterprofiler
enrichGO
barplot
dotplot
5.7 years ago
MAP
• 0
0
votes
2
replies
925
views
ClusterProfiler: enrichResult table with genes that do not have GO-term
ClusterProfiler
enrichGO
updated 4.2 years ago by
James W. MacDonald
65k • written 4.2 years ago by
Reb
• 0
2
votes
10
replies
12k
views
keytype not supported in clusterprofiler when it is ensembl IDs?
clusterProfiler
enrichGO
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
kavator
▴ 30
2
votes
8
replies
1.6k
views
gene enrichment using enrichGO function throuth annotationHub orgDb
software error
enrichGO
annotationHub
clusterProfiler
Job
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
bnajafpour
• 0
1
vote
1
reply
1.6k
views
enrichGO results
clusterProfiler
enrichGO
21 months ago
Shakiba
• 0
0
votes
1
reply
9.2k
views
"No genes can be mapped...." using enrichGO in clusterProfiler
R
TAIR
clusterProfiler
enrichGO
Arabidopsis
updated 3.0 years ago by
Guido Hooiveld
★ 3.9k • written 3.0 years ago by
abby-s
• 0
0
votes
2
replies
1.5k
views
Too many genes in GO term after enrichGO
clusterProfiler
enrichGO
clusterPro
2.4 years ago
slimyMS
• 0
2
votes
2
replies
1.8k
views
Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
enrichGO
2.9 years ago
dailing57
• 0
1
vote
1
reply
1.2k
views
clusterProfiler enrichGO under-represented term
clusterProfiler
enrichGO
6.6 years ago
Francois Marchildon
▴ 20
2
votes
15
replies
661
views
Problems with enrichGO
clusterProfiler
enrichGO
updated 10 weeks ago by
Michael Love
41k • written 11 weeks ago by
cinzia.spagnoli
• 0
0
votes
2
replies
1.8k
views
How to select a specific onthology after runing enrichGO for all 3 onthology
enrichGO
clusterprofiler
5.7 years ago
MAP
• 0
0
votes
0
replies
794
views
Simplify - clusterProfiler
RNASeq
simplify
clusterProfiler
enrichGO
simplifyEnrichment
19 months ago
estafana.t98
• 0
2
votes
2
replies
1.1k
views
Using clusterProfiler for depletion analysis
clusterProfiler
enrichGO
2.4 years ago
samsiljee
• 0
14 results • Page
1 of 1
Recent ...
Replies
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
pl23
• 0
Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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