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enrichGO
•
reset
4
votes
2
replies
6.8k
views
How to export enrichGO results for future visualization with barplot, dotplot, emapplot...
clusterprofiler
enrichGO
barplot
dotplot
5.8 years ago
MAP
• 0
2
votes
2
replies
1.1k
views
Using clusterProfiler for depletion analysis
clusterProfiler
enrichGO
2.5 years ago
samsiljee
• 0
2
votes
2
replies
1.8k
views
Mapping nothing when doing Enrichment Analysis of the TAIR using enrichGO in R
enrichGO
3.0 years ago
dailing57
• 0
2
votes
10
replies
12k
views
keytype not supported in clusterprofiler when it is ensembl IDs?
clusterProfiler
enrichGO
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
kavator
▴ 30
2
votes
8
replies
1.7k
views
gene enrichment using enrichGO function throuth annotationHub orgDb
software error
enrichGO
annotationHub
clusterProfiler
Job
updated 4.0 years ago by
James W. MacDonald
65k • written 4.0 years ago by
bnajafpour
• 0
2
votes
5
replies
3.2k
views
How to use EnrichGo of Cluster Profiler
EnrichGO
clusterProfiler
written 3.3 years ago by
Carolina
• 0
2
votes
15
replies
715
views
Problems with enrichGO
clusterProfiler
enrichGO
updated 12 weeks ago by
Michael Love
42k • written 3 months ago by
cinzia.spagnoli
• 0
1
vote
1
reply
1.2k
views
clusterProfiler enrichGO under-represented term
clusterProfiler
enrichGO
6.6 years ago
Francois Marchildon
▴ 20
1
vote
1
reply
1.6k
views
enrichGO results
clusterProfiler
enrichGO
22 months ago
Shakiba
• 0
0
votes
1
reply
9.3k
views
"No genes can be mapped...." using enrichGO in clusterProfiler
R
TAIR
clusterProfiler
enrichGO
Arabidopsis
updated 3.0 years ago by
Guido Hooiveld
★ 3.9k • written 3.0 years ago by
abby-s
• 0
0
votes
2
replies
935
views
ClusterProfiler: enrichResult table with genes that do not have GO-term
ClusterProfiler
enrichGO
updated 4.3 years ago by
James W. MacDonald
65k • written 4.3 years ago by
Reb
• 0
0
votes
0
replies
802
views
Simplify - clusterProfiler
RNASeq
simplify
clusterProfiler
enrichGO
simplifyEnrichment
20 months ago
estafana.t98
• 0
0
votes
2
replies
1.8k
views
How to select a specific onthology after runing enrichGO for all 3 onthology
enrichGO
clusterprofiler
5.8 years ago
MAP
• 0
0
votes
2
replies
1.5k
views
Too many genes in GO term after enrichGO
clusterProfiler
enrichGO
clusterPro
2.5 years ago
slimyMS
• 0
14 results • Page
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Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package)
by
Michael Love
42k
Here is some example code <https://gist.github.com/mikelove/cbbc84634b6854c865cb5eb08ad9b245>
Comment: How to use spike-in information (sequences from another species) with DESeq2::DE
by
maria.soler
• 0
Hi, I have a question barely related to this topic. Do you use a custom reference genome combining your organism and the one used as a spik…
Answer: Differential gene expression analysis results
by
ATpoint
★ 4.1k
Pease do not open multiple posts for the same issue: https://support.bioconductor.org/p/9158194/#9158222 The support site is not meant f…
Comment: deseq2 results
by
sajadahmad41454
• 0
thank you for your response, should i remove or discard that sample? since the red outlier on left represents one of healthy samples.
Comment: deseq2 results
by
swbarnes2
★ 1.4k
It looks like the PCA plot of a real RNASeq experiment. The red outlier on the left might be the mathematical reason why you have few vali…
Votes
Comment: Log-cpm values from limma
Comment: Log-cpm values from limma
Comment: deseq2 results
Comment: deseq2 results
Answer: Multi-factorial, longitudinal disease progression analysis with unbalanced patie
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