Showing : epivizr • reset
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What's new in epiviz
epivizr metavizr
7.6 years ago Hector Corrada Bravo ▴ 60
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1
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1.4k
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Survey on interactive visualization and Bioconductor
visualization epivizr
8.5 years ago Hector Corrada Bravo ▴ 60
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1.1k
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Epivisr namespace error
epivizr
updated 8.6 years ago by ▴ 60 • written 8.6 years ago by ▴ 20
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Interactive Visualization with Epivizr (what's new in this release)
epivizr visualization
10.1 years ago Hector Corrada Bravo ▴ 60
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1.1k
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epivizr: Input data type for heatmap
epivizr epivizr
updated 10.5 years ago by ▴ 60 • written 10.6 years ago by ★ 1.3k
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BioC 2013, July 17 (Developer Day) 18-19: 'Early' registration deadline July 1
Cheminformatics Visualization Cancer Ovarian DEXSeq minfi DESeq2 BaseSpaceR epivizr minfi
11.5 years ago Martin Morgan 25k
6 results • Page 1 of 1
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Answer: Can DESeq2's design compensate for sequencing experimental design shortcomings? by Michael Love 43k
For statistical analysis plans, I recommend working with a local statistician or someone familiar with linear models in R. I have to reserv…
Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K? by xiaofeiwang198266 • 0
Thanks for your reply!
Comment: Issues with seqlevelsStyle when making custom txdb objects for genomes/annotatio by Hervé Pagès 16k
> I have requested gDNAx developers for a feature request to turn off seqlevelsStyle(txdb) Yes, that's the right course of action. `seqlev…
Comment: ISO a solution to rank-order introns by transcript by mat149 ▴ 80
Hey, In revisiting this question, the following code works for the '+' strand. I am having issues with demarcating intron rank by transcri…
Comment: Normalizing batch effects using technical replicates for DGE analysis between tw by Gordon Smyth 52k
Since the intra-block correlation is negative, it would be best to remove `block` from the model. My experience with genetically identical…
Votes
C: edgeR and lack of counts ID on CPM matrix
A: DESeq2 Following RSEM
A: importing RSEM data into DESeq2
A: Expected counts from RSEM in DESeq2
A: Using RSEM reads for DESeq2
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