Bioconductor Expresiondataset

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1.6k

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limma CEL GEO affydata expresiondataset

updated 7.8 years ago by Robert Castelo ★ 3.0k • written 7.8 years ago by libya.tahani • 0

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2.8k

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microarray biobase expresiondataset r

8.1 years ago floodking • 0

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2.1k

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combine expresiondataset insilicomerging

8.2 years ago alakatos ▴ 130

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2.7k

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bioconductor expresiondataset affymetrixchip differential gene expression

8.6 years ago • updated 8.5 years ago svlachavas ▴ 810

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7.6k

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bioconductor pca ggbiplot expresiondataset

updated 8.6 years ago by James W. MacDonald 63k • written 8.6 years ago by svlachavas ▴ 810

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Comment: DMRcate design by Jitendra ▴ 10

Thanks James, do I also need to mention 'contrasts=FALSE' in cpg.annotate.And also what to mentions in analysis.type="differential",/ "ANO…

Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

I don't know the details but do you mean using `HDF5RealizationSink` or `TENxRealizationSink` will make it possible to writing sparse multi…

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Ok, I understood. How about "writing" to HDF5? Are you going to implement `write_block_as_sparse` in `SparseArray` package?

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

> So do you means the specification change from DelayedArray's read_sparse_block to SparseArray's read_block_as_sparse will accelerate the …

Comment: DelayedArray::read_sparse_block by Koki ▴ 10

Thanks for your reply. So do you means the specification change from `DelayedArray`'s `read_sparse_block` to `SparseArray`'s `read_block_a…

Votes

Answer: DMRcate design

Comment: DMRcate design

Answer: What MetaPhlAn3 database was used in cMD 3?

Comment: Speeding up of DelayedArray::write_block()

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