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Error with dmrfinder bsseq after combining Bsseq obj
bsseq r package
dmrfinder
delayedarray
combine
5.1 years ago
br
• 0
1
vote
1
reply
718
views
Combining more than 2 ExpressionSets at the same time,
expressionset
combine
concatenate
combineTwoExpressionSet
6.3 years ago
g_draculla
▴ 10
1
vote
3
replies
779
views
Problem with function combine regarding merging two data frames based on their common rows
bioconductor
merge data frames
combine
biocgenerics
6.8 years ago
Konstantinos Yeles
▴ 70
1
vote
2
replies
1.9k
views
Combining ExpressionSet objects : error with function merge() in "inSilicoMerging"
combine
expresiondataset
insilicomerging
7.1 years ago
alakatos
▴ 120
4 results • Page
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Comment: errors in annotation
by
James W. MacDonald
60k
If you go to NCBI and the data appear to be correct, then they have evidently already fixed the errors you have found. The data we download…
Comment: How should I set my eps value in cluster profiler?
by
Guido Hooiveld
★ 3.3k
Under the hood `clusterProfiler` makes use of a (fast) GSEA algorithm implemented in the package `fgsea` (function `fgseaMultilevel`). The …
Comment: Error using ChAMP SVD analysis
by
CristEin
• 0
In fact, I found that the author may have caused the problem class(myNorm) %>% length() #equals 2 class(myNorm) == "data.…
Comment: Error in Create switchAnalyzeRlist
by
k.vitting.seerup
▴ 120
Oh sorry I missed the species. Yes they also match for chicken :-) (both being called "ENSGALT..."). The other is from NCBI
Comment: Error in Create switchAnalyzeRlist
by
bpshtiwan
▴ 10
Ok, have you looked cDNA fasta file for Chicken (maternal Broiler) Gallus gallus? I am using Kallisto for alignment and quantification. He…
Votes
DEXseq error unable to find an inherited method for function NSBS for signature CompressedIntegerList
Answer: Error in Create switchAnalyzeRlist
Answer: Error in Create switchAnalyzeRlist
A: DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Ge
DeSeq2 results converting ENSG IDs to Gene Symbols, more than one ENSG ID per Gene symbol
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