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Online Venn diagram generator where I can paste text files containing gene name lists to get the diagram
Venndiagram
files
text
2.2 years ago
ratto
• 0
1
vote
2
replies
1.1k
views
Working with compressed fasta files?
files
gzip
5.2 years ago
psschlogl
• 0
0
votes
1
reply
936
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MEV and TXT files
Files
TXT
updated 5.4 years ago by
Gordon Smyth
52k • written 5.4 years ago by
ekl
• 0
1
vote
4
replies
2.1k
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Merging two files based on the identifier column (gene symbols)?
merge
files
R
packages
gene annotations
5.5 years ago
mohammedtoufiq91
▴ 10
3
votes
9
replies
5.9k
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txi <- tximport(files, type="salmon", tx2gene=tx2gene) Error in tximport(files, type = "salmon", tx2gene = tx2gene) : all(file.exists(files)) is n…
deseq2
tximport
file.path
files
file.exists
6.0 years ago
Leo K
• 0
0
votes
1
reply
2.3k
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Merging files with gene expression data
merge
rnaseq
files
updated 8.4 years ago by
jayme.rickman
• 0 • written 8.4 years ago by
BioinfGuru
▴ 70
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Exact OMCIS reproduction down to the values without code and software version is borderline impossible. Either use the values as provided o…
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You've got it backwards. It should be ``` adult_res_df$symbol <- mapIds(org.Rn.eg.db, keys = rownames(adult_res_df), column = "ENSEMBL"…
Comment: DESeq2 swap ensembl gene id rownames with gene symbol column
by
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• 0
Alternatively, you could have added a column with the common gene names. Assuming your dataframe `df` was created using `DESeq()`, somethin…
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It appears that 'negative regulation of glycogen biosynthesis' has an 'is a' relationship with 'glycogen biosynthetic process' https://www.…
Comment: Can't post a question?
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DavideSant
• 0
Thank you, this was super useful!
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