updated 7.0 years ago by
Habil Zare
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written 7.7 years ago by
cardenasca
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Comment: Can the limma package be applied to Log2 RUV-normalized data?
by
Gordon Smyth
49k
515 samples is certainly large enough.
Comment: Correct the batch effect in methylation analysis in R
by
kyj2226
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0
Thank you for your kind response Gordon! :)
Have a good time at the end of the year!
Best,
Yujin Kim
Comment: Agilent Microarray Gene Oncology analysis gone wrong
by
SamGG
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320
Gordon said to let coef to its default value:
topTable(fit, n=20)
Comment: Can the limma package be applied to Log2 RUV-normalized data?
by
Shaimaa Gamal
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0
Hi Gordon,
On what basis we can determine whether the dataset is large or not? I am working on a dataset of 515 samples and 5440 genes. I w…
Comment: Agilent Microarray Gene Oncology analysis gone wrong
by
samagbeyimodupe
•
0
Thank you for the quick response. i ran the codes again and removed all the other arguments for eBayes except for fit.
I ran the line of co…
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