Bioconductor FrmaTools

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frmaTools

updated 7 months ago by James W. MacDonald 68k • written 7 months ago by Hans • 0

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frmaTools affy

updated 13 months ago by James W. MacDonald 68k • written 13 months ago by michelafrancesconi8 • 0

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frma frmatools

updated 7.0 years ago by Matthew McCall ▴ 830 • written 7.0 years ago by skol • 0

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affymetrix microarrays frmatools altcdfenvs

updated 7.1 years ago by Matthew McCall ▴ 830 • written 7.1 years ago by osieman52 • 0

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frma frmatools affy

updated 8.5 years ago by Matthew McCall ▴ 830 • written 8.5 years ago by yesitsjess • 0

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frma frmatools affymetrix microarrays

9.0 years ago jperezrogers • 0

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frma frmatools

updated 10.2 years ago by Matthew McCall ▴ 830 • written 10.2 years ago by Ryan C. Thompson ★ 7.9k

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frma frmatools

updated 10.2 years ago by Matthew McCall ▴ 830 • written 10.2 years ago by Ryan C. Thompson ★ 7.9k

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annotation frma frmatools

updated 10.3 years ago by Matthew McCall ▴ 830 • written 10.3 years ago by Tim Triche ★ 4.2k

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frmaTools frmaTools

11.5 years ago Loraine, Ann ▴ 50

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cdf frmaTools cdf frmaTools

updated 11.8 years ago by Matthew McCall ▴ 830 • written 11.8 years ago by Ty Thomson ▴ 100

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Microarray probe frma frmaTools Microarray probe frma frmaTools

updated 11.8 years ago by Matthew McCall ▴ 830 • written 11.8 years ago by Tae-Hoon Chung ▴ 70

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probe frmaTools probe frmaTools

updated 11.8 years ago by Matthew McCall ▴ 830 • written 11.8 years ago by Tae-Hoon Chung ▴ 70

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cdf frma frmaTools cdf frma frmaTools

updated 12.0 years ago by Stephen Piccolo ▴ 600 • written 12.0 years ago by Guest User ★ 13k

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Microarray Annotation Normalization affy PROcess safe frma frmaTools Microarray affy

updated 12.4 years ago by Benilton Carvalho ★ 4.3k • written 12.4 years ago by wrighth ▴ 260

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Normalization probe oligo frma frmaTools Normalization probe oligo frma frmaTools

12.7 years ago Schott, Johanna ▴ 20

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Normalization probe frma frmaTools Normalization probe frma frmaTools

updated 12.7 years ago by James W. MacDonald 68k • written 12.7 years ago by Guest User ★ 13k

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Comment: single-cells RNA-seq analysis by MAST with unbalanced group size by achoppe ▴ 10

Hello! I also have compared uneven groups of cells - 517 cells in one group and 26 in the other. I am wondering if you know any published …

Comment: DESeq2 model - How to test case/control time course model when taking account wi by wuwenhui2 • 0

Thanks, I figured it out.

Comment: Design Matrix with paired and independent samples plus RUVg Spike-in normalizati by Mei • 0

I have a similar experiment with 7 paired samples (T0 and T1) in each of 4 outcome groups. I am using RUVr combined with limma-voom, so I a…

Comment: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran by Arctic • 0

Many thanks for the link to the C++ code. I will see if I can find someone with C++ experience to help me with the code breakdown from her…

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran by Aaron Lun ★ 28k

It's calling C++ code, see the relevant function definitions on [GitHub](https://github.com/knncolle/BiocNeighbors/blob/master/src/generics…

Votes

A: single-cells RNA-seq analysis by MAST with unbalanced group size

Comment: plyranges: find exact GRanges match keeping metadata columns

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran

Is it possible to speed up VariantAnnotation's rowRanges function when converting to a dataframe?

Answer: Is it possible to speed up VariantAnnotation's rowRanges function when convertin

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