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gagedata
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GAGE kegg.gsets() self-signed certificate error
gageData
gage
6 months ago
Lucas
• 0
0
votes
0
replies
515
views
How to use GAGE with my own metagenomic KOFams data
kegg.gsets
gageData
gage
KEGG
14 months ago
cereyredondo
• 0
0
votes
0
replies
1.1k
views
Pathway Analysis using GAGE
gage
RNASeq
gageData
Pathways
3.4 years ago
OST
• 0
6
votes
5
replies
2.2k
views
KEGG analysis for plasmodium
KEGG
gage
gageData
pathview
updated 4.5 years ago by
Luo Weijun
★ 1.6k • written 4.5 years ago by
MOHAMMAD
• 0
0
votes
0
replies
897
views
Setting threshold with gage for gene set analysis
gage
gageData
4.5 years ago
jd348
• 0
1
vote
2
replies
1.6k
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Can I create a gene set using GAGE?
gage
pathview
gageData
written 4.7 years ago by
Emilia
▴ 40
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Comment: GO.db and others package Download failure
by
James W. MacDonald
68k
Also, you never need to use anything but `BiocManager::install` to install any package, which has the beneficial side effect of ensuring th…
Comment: GO.db and others package Download failure
by
James W. MacDonald
68k
Yes. Your packages have odd Y version numbers (where the version is X.Y.Z). That means they are devel packages (release versions have even …
Comment: GO.db and others package Download failure
by
Skyler
• 0
Am I using Bioc-devel?
Comment: GO.db and others package Download failure
by
James W. MacDonald
68k
Is there a reason to use Bioc-devel? If not, you should be using the release version (which I am, and which installs `GO.db` without compla…
Comment: GO.db and others package Download failure
by
Skyler
• 0
Hi James, Below I have inserted all of my code. I have run r as an administrator and not as an administrator. I have changed my CRANmirror …
Votes
Comment: readDNAStringSet with non DNA characters
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Answer: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
Comment: Guidance on limma for pseudobulk scRNA-seq with multi-factor design
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