updated 8 months ago by
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written 8 months ago by
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updated 8.0 years ago by
Martin Morgan
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written 8.0 years ago by
Knut Hansen
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Comment: DESeq: Error in DESeqDataSet(se, design = design, ignoreRank) : some values i
by
ATpoint
★
3.6k
What is the output of
below_zero <- apply(miRNA_counts < 0, 1, sum) > 0
miRNA_counts[below_zero,,drop=FALSE]
Comment: Problem loading HDF5Array in R 4.3.2
by
Mike Smith
★
6.2k
Based on the error message this looks like the "invalid permissions" are referring to something in memory rather than your file system. If…
Comment: Problem making orgdb package for bacteria (Pseudomonas) using annotation hub and
by
Aastha Kapoor
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0
After several attempts the code has worked. I connected to a faster internet connection. set the timeout (1000000) and run the command. I …
Comment: DESeq2 estimateSizeFactors iterate takes too long
by
Karthik
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0
Hello,
I agree with you, and we are in process of working with collaborators, but I wanted to get a general opinion on the data and get a …
Comment: It's possible to use clusterProfiler without an annotationDBI package
by
Guido Hooiveld
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3.8k
Code to show it works:
> library(clusterProfiler)
>
> ## use provided 10 IDs, plus as last one add ID that has a GO annotati…
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