Bioconductor Gsva

Showing : gsva • reset

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GSVA

3 days ago • updated 2 days ago Chris • 0

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479

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GSVA

18 days ago • updated 16 days ago Alex • 0

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479

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GSVA

updated 22 days ago by James W. MacDonald 65k • written 23 days ago by Lucy ▴ 60

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622

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ssgsea GSVA biotype proteincoding msigdb

updated 5 months ago by Robert Castelo ★ 3.3k • written 5 months ago by snijesh ▴ 20

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403

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GSVA

updated 8 months ago by Robert Castelo ★ 3.3k • written 8 months ago by Heba • 0

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1.2k

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GSVA RNASeq limma

updated 9 months ago by Gordon Smyth 50k • written 10 months ago by Jonathan ▴ 10

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1.6k

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escape UCell GSVA

updated 5 months ago by arina • 0 • written 14 months ago by Omer • 0

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1.8k

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GSVA

updated 8 weeks ago by Moritz ▴ 10 • written 2.9 years ago by resa • 0

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20k

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ssgsea gsva piano egsea

updated 5 months ago by amin8w ▴ 10 • written 6.8 years ago by sina.nassiri ▴ 130

9 results • Page 1 of 1

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Comment: More regions in union when increasing DBA$config$mergeOverlap by Ian D. ▴ 70

Hello. Thanks for the reply. Sorry about this. My testing is telling me that 1 is the default (a gap), not -1 (1bp overlap). Negative …

Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k

> I am just re-processing due to being uncertain about how they used the edgeR analysis to reach gene level edgeR devs published something…

Comment: Differences in differential analysis methods for RNA-Seq by james.zhang20 • 0

Thanks for the explanations, it has helped clarify some things. Unfortunately, I am working from an early access public dataset (https://do…

Answer: Deseq2 and Normalization of RNA sequencing data by ATpoint ★ 4.1k

There is no expectation of normality that is realistic in terms of expression level. Levels are widely different between genes, and counts …

Comment: Differences in differential analysis methods for RNA-Seq by ATpoint ★ 4.1k

MAGeCK is a command line tool that is easy to use. I recommend you use it because a) the logFCs from DESeq2 and MAGeCK will be very similar…

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A: Error in DESeqDataSet : some values in assay are not integers

Bioconductor 3.19 is Released!

Answer: DEseq2 coefficient

SPIA plotP giving error

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Popular Question to rohitsatyam102 ▴ 20