Showing : hopach • reset
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Hopach: distancematrix and distancevector do not return identical results
documentation bug hopach euclidean distance
2.2 years ago txema.heredia • 0
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5
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HOPACH error: "negative length vectors are not allowed" in distancematrix(). Matrix too large?
hopach
updated 9.0 years ago by ▴ 110 • written 9.1 years ago by • 0
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3
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1.1k
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hopach generates a wrong output
hopach
9.4 years ago • updated 9.3 years ago Alogmail2@aol.com ▴ 90
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displaying clustering results in TreeView or MapleTree
Microarray Clustering Kidney Ovarian probe hopach Microarray Clustering Kidney Ovarian
12.3 years ago Mark Baumeister ▴ 40
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CRAN packages maintained by you
hexbin gpls RBGL impute Icens hopach maanova RLMM CORREP cycle hexbin gpls RBGL Icens
updated 12.5 years ago by ▴ 430 • written 12.5 years ago by ▴ 10
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13
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2.2k
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Bioconductor Digest, Vol 87, Issue 10
Clustering hopach Clustering hopach
updated 13.9 years ago by ▴ 160 • written 14.0 years ago by ▴ 130
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
14.6 years ago Samuel GRANJEAUD - IR/ICIM ▴ 60
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992
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
14.9 years ago Paolo Innocenti ▴ 320
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Problem with Hopach: "Error in dmat[ord, ]"
drosophila2 hopach drosophila2 hopach
updated 14.9 years ago by 6.7k • written 14.9 years ago by ▴ 320
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Hopach cluster quality metrics
hopach hopach
15.5 years ago Khan, Anar ▴ 30
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HOPACH and .cdt which doesn't work with javatreeview
Clustering hopach Clustering hopach
15.6 years ago Sébastien Tourlet ▴ 20
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1
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1.1k
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HOPACH clustering of genes
Clustering hopach Clustering hopach
updated 15.8 years ago by ▴ 20 • written 15.8 years ago by ▴ 100
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Why makeoutput() function is not included in hopach 1.4.3 version
Microarray Clustering hopach Microarray Clustering hopach
15.9 years ago Suprabhath Reddy ▴ 10
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1
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971
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How to extract Hopach MSS value
Clustering hopach Clustering hopach
updated 16.2 years ago by 6.7k • written 16.3 years ago by ▴ 20
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1
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2.8k
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ReadAffy can not find function read.AnnotatedDataFrame
Biobase genefilter affydata limma simpleaffy hopach affyio Biobase genefilter affydata
updated 17.4 years ago by 65k • written 17.4 years ago by ▴ 510
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914
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hopach and heatmap
Clustering hopach Clustering hopach
17.9 years ago Ivan Baxter ▴ 60
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881
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About Hopach package
hopach hopach
18.6 years ago kpollard ▴ 110
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755
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About Hopach package
Clustering hopach Clustering hopach
18.7 years ago z3076426@student.unsw.edu.au ▴ 10
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How to use distance functions from hopach package in a heatmap?
hopach hopach
18.8 years ago kpollard ▴ 110
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1
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958
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R terminated when i try HOPACH in a loop,why?
hopach hopach
updated 19.0 years ago by ★ 7.4k • written 19.0 years ago by ▴ 90
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(no subject)
hopach hopach
19.1 years ago kpollard ▴ 110
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874
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[BioC}: export Hopoah to treeview
hopach hopach
19.1 years ago Anthony Bosco ▴ 500
22 results • Page 1 of 1
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Comment: Deseq2. decontXcounts not integers. Useful alternative? by ATpoint ★ 4.0k
I do not know this decontamination tool you use but generally: If these counts are basically "corrected" raw counts in the sense that they'…
Answer: Improving the design matrices vignette in RNAseq123 by Gordon Smyth 50k
Thanks to Shian Su, we have confirmed that the problem in the design matrices vignette html is caused by a bug in knitr 1.44 (to do with sp…
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2) by winwater0928 • 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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Scholar to James W. MacDonald 65k
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