Bioconductor Pd.hta.2.0

Showing : pd.hta.2.0 • reset

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package installation pd.hta.2.0

7.7 years ago alexander2073 • 0

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oligo pd.hta.2.0 CEL R windows 7

7.7 years ago ladhikari • 0

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pd.hta.2.0 hta2.0 affycoretools

updated 7.7 years ago by James W. MacDonald 68k • written 7.7 years ago by relathman ▴ 20

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pd.hta.2.0 R

8.7 years ago • updated 8.2 years ago s.munster ▴ 40

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pd.hta.2.0

updated 8.5 years ago by James W. MacDonald 68k • written 8.5 years ago by pbachali ▴ 50

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software error annotation genefilter pd.hta.2.0

updated 8.6 years ago by Martin Morgan 25k • written 8.6 years ago by Lian Liu ▴ 20

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1.4k

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oligo rsqlite pd.hta.2.0

updated 8.6 years ago by James W. MacDonald 68k • written 8.6 years ago by Vincent J. Carey, Jr. 6.7k

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hta20sttranscriptcluster.db probe mapping annotation pd.hta.2.0 annotationdbi

updated 8.6 years ago by James W. MacDonald 68k • written 8.6 years ago by relathman ▴ 20

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hta pd.hta.2.0 hta20sttranscriptcluster.db

updated 8.8 years ago by James W. MacDonald 68k • written 8.8 years ago by giroudpaul ▴ 40

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3.1k

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affymetrix microarrays microarray pd.hta.2.0 oligo rma

updated 9.1 years ago by James W. MacDonald 68k • written 9.1 years ago by jennifer.drake • 0

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pd.hta.2.0 ggh3 oligo glue grant

updated 9.4 years ago by James W. MacDonald 68k • written 9.4 years ago by Robert Castelo ★ 3.4k

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1.7k

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pd.hta.2.0 transcript differential gene expression

updated 9.5 years ago by James W. MacDonald 68k • written 9.5 years ago by jacorvar ▴ 40

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oligo pdInfoBuilder pd.hta.2.0

9.8 years ago tangboyun ▴ 30

13 results • Page 1 of 1

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Comment: Cannot extract size factor from DESeq2 analysis by s.malik • 0

Dear Mike, using tximeta and following code, is this fine to extract normalized counts after `sizeFactors(dds)` gives NULL? `dds <- DESeq…

Comment: Design formula for circadian time-course data for vst() function by Vishnu • 0

Thank you so much for your reply.

Comment: Analyzing TnSeq data with DESeq2 by Tom • 0

[Doncaster Locksmith][1] delivers trusted, efficient security services tailored to your needs. Analyzing TnSeq data with DESeq2 may uncover…

Answer: Design formula for circadian time-course data for vst() function by ATpoint ★ 4.8k

This was asked before: https://support.bioconductor.org/p/9148734/#9148812 Take-home message is that influence is minor, as you see your…

Comment: Filtering after DESeq by caroline.zanchi • 0

... I did it. It does filter out quite a bit of genes : ``` keep <- filterByExpr(dds, group="host_treatment_generation",min.count = 10, mi…

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Comment: Filtering after DESeq

A: Normalized counts from DESeq2 results in similar but not equal total read count?

A: DESeq2: Different Dispersions for different sample groups

A: Contrasts & coefficients in limma

Answer: How to formulate 2 factor nested design in DESeq2

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