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Java error while running HiCDC overview code
JuicerTools
HiC
HiCDCPlus
Java
Juicer
written 23 months ago by
IsMM
• 0
0
votes
1
reply
1.1k
views
SELEX: Rookie mistake (solved)
java
selex
barcode
5.2 years ago
jeleo
• 0
0
votes
1
reply
1.6k
views
MSGFplus: fail to load on Mac OSX 10.13.6 due to javaVersion error
msgfplus
mac
java
updated 7.3 years ago by
Mike Smith
★ 6.6k • written 7.3 years ago by
dgemoets
• 0
0
votes
0
replies
1.5k
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Rjava proxy configuration ?
rJAVA
java
proxy
connectiontimeout
rdavidwebservice
9.5 years ago
Julien FOURET
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0
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0
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1.7k
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Job:
Senior Bioinformatics Researcher - University of Adelaide, South Australia
bioinformatician job
australia
veterinary science
c++
java
Job
10.0 years ago
Steve Pederson
▴ 170
0
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0
replies
2.0k
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Job:
Calling all Clinical Genomic Scientist
computational biology
genomics
genetics
Python
java
Job
10.4 years ago
careers
• 0
0
votes
3
replies
2.0k
views
Unable to execute java by using the Rscript
arrayqualitymetrics
java
r
10.4 years ago
aaryan
• 0
7 results • Page
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Answer: After running samtools, the featureCounts command crashed.
by
Kevin Blighe
★ 4.0k
Hi Rui Tang, The "buffer overflow detected" error in featureCounts usually stems from a corrupted or malformed GTF file, often due to tr…
Answer: Problem with the TMB plot
by
Kevin Blighe
★ 4.0k
Hi, The linear TMB plot with no clustering suggests your variant calls may lack sample-specific discrimination, likely due to filtering ap…
Answer: gene Set with high AUC score but no cells assigned to cell type
by
Kevin Blighe
★ 4.0k
Hi, You have correctly identified the issue: AUCell's automatic threshold selection is conservative by design, aiming for specificity to…
Answer: featureCounts -L: high unassigned:mapq fraction
by
Kevin Blighe
★ 4.0k
Hi Katarzyna, The discrepancy arises because your samtools stats were restricted to genic regions only, where alignments are typically o…
Answer: Streamlining the computing time for MiloDE p-value correction in large dataset?
by
Kevin Blighe
★ 4.0k
Hi Joseph, I agree with ATpoint's suggestion that pseudobulk aggregation (e.g., via aggregateData in scran or similar) would likely be far…
Votes
Answer: DESeq2 design for haplotype MPRA
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Failure to download resources (MeSHDb) from AnnotationHub
Answer: Suppress warning in RHDF5 write
Answer: Suppress warning in RHDF5 write
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