Bioconductor Keggprofile

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bioconductor annotation keggprofile

updated 5.9 years ago by James W. MacDonald 65k • written 5.9 years ago by CF556 • 0

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KEGGSOAP KEGGgraph keggorthology clusterProfiler KEGGprofile PathNet KEGGSOAP KEGGgraph

updated 10.7 years ago by Luo Weijun ★ 1.6k • written 10.8 years ago by enricoferrero ▴ 660

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GO KEGGprofile GO KEGGprofile

11.3 years ago gregory voisin ▴ 430

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1.5k

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Organism KEGGprofile

9.6 years ago zhao shilin ▴ 60

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GO KEGGprofile GO KEGGprofile

11.4 years ago gregory voisin ▴ 430

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1.3k

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KEGGprofile

updated 9.6 years ago by zhao shilin ▴ 60 • written 9.6 years ago by artur ▴ 80

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Pathways SPIA KEGGprofile Pathways SPIA KEGGprofile

11.3 years ago Tarca, Adi ▴ 570

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1000

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keggprofile UNIX error exit

9.4 years ago gregory voisin ▴ 430

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930

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GO KEGGprofile GO KEGGprofile

11.3 years ago Dan Tenenbaum ★ 8.2k

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Proteomics Pathways KEGGprofile Proteomics Pathways KEGGprofile

11.3 years ago slzhao ▴ 10

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Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by James W. MacDonald 65k

Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…

Comment: Math expression in shapeCustom legend in EnhancedVolcano by pl23 • 0

Hi, Yes, I've tried this, but I am not sure if it is possible to assign `bquote` values to the names of a vector. In particular, if I use…

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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)

biomaRt error: database disk image is malformed

Comment: biomaRt : No lock file for BiocFileCache

Answer: Cross-species analysis - how to compute the mid parent value?

Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2

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Scholar to James W. MacDonald 65k

Supporter to JKim • 0