Showing : keggprofile • reset
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convertId returning "attempt to select less than one element in integerOneIndex" Error
bioconductor annotation keggprofile
updated 5.9 years ago by 65k • written 5.9 years ago by • 0
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run KEGGprofile sofware on UNIX server
keggprofile UNIX error exit
9.4 years ago gregory voisin ▴ 430
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Re: KEGGprofile: "Error in phyper - Non-numeric argument to mathematical function" when using non model organism
Organism KEGGprofile
9.6 years ago zhao shilin ▴ 60
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KEGGprofile: "Error in phyper - Non-numeric argument to mathematical function" when using non model organism
KEGGprofile
updated 9.6 years ago by ▴ 60 • written 9.6 years ago by ▴ 80
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About the state of KEGG-related packages
KEGGSOAP KEGGgraph keggorthology clusterProfiler KEGGprofile PathNet KEGGSOAP KEGGgraph
updated 10.7 years ago by ★ 1.6k • written 10.7 years ago by ▴ 660
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Overrepresentation pathway with KEGGPROFILE and SPIA
Proteomics Pathways KEGGprofile Proteomics Pathways KEGGprofile
11.3 years ago slzhao ▴ 10
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Bioconductor Digest, Vol 119, Issue 5: Overrepresentation pathway with KEGGPROFILE and SPIA
Pathways SPIA KEGGprofile Pathways SPIA KEGGprofile
11.3 years ago Tarca, Adi ▴ 570
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About Rstudio via Amazon web services.
GO KEGGprofile GO KEGGprofile
11.3 years ago Dan Tenenbaum ★ 8.2k
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Kegg Profile package problem
GO KEGGprofile GO KEGGprofile
11.3 years ago gregory voisin ▴ 430
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Problem to download Kegg map from KEGGprofile package
GO KEGGprofile GO KEGGprofile
11.4 years ago gregory voisin ▴ 430
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Comment: Error for AnnotationForge makeOrgPackageFromNCBI function by James W. MacDonald 65k
I don't really follow what you are saying. All you have to do is delete the NCBI.sqlite db and *re-run the script exactly as you did above.…
Comment: Methylation Analysis experiment design using Limma by hortense96 • 0
Thank you very much for your reply and your suggestion, as I'm having a bit of trouble finding information on how to manage this part of th…
Comment: Limma design with continuous and categorical covariates by hortense96 • 0
Hello, I'm trying to do a differential methylation analysis with the Limma package and was wondering if you had any suggestions on how to …
Answer: minfi::read.metharray.exp by Basti ▴ 770
Could you show `list.files("~/Users/clarachretienneau/Desktop/clock epigenetic/PJ1209132_ScanData")` ? There may be a problem related to th…
Comment: DESeq2 - dispersion estimation when there is none by WardDeb • 0
Thank you for the pointers, I'll revert back again to the method section of the paper. As for the negative relationship of the estimated di…
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Answer: OrgDb for maize
Answer: DESeq2 - dispersion estimation when there is none
Comment: Cannabis and KEGGgraph
Comment: Cannabis and KEGGgraph
Answer: Cannabis and KEGGgraph
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