Bioconductor Made4

Showing : made4 • reset

votes

replies

2.1k

views

made4 plotarrays correspondence analysis ellipse

updated 8.5 years ago by Aedin Culhane ▴ 510 • written 8.9 years ago by maartenvandijk • 0

votes

replies

978

views

Cancer made4 Cancer made4

12.0 years ago Aedin Culhane ▴ 510

votes

1.1k

views

made4 made4

updated 12.0 years ago by Aedin Culhane ▴ 510 • written 12.0 years ago by Valerie Obenchain ★ 6.8k

votes

replies

879

views

made4 made4

12.0 years ago Barbara Bo-Ju Shih ▴ 40

votes

replies

1.8k

views

Cancer graph made4 Cancer graph made4

13.6 years ago Aedin Culhane ▴ 510

votes

replies

1.2k

views

made4 made4

updated 13.9 years ago by Steve Shen ▴ 330 • written 13.9 years ago by Rohit Farmer ▴ 170

votes

replies

860

views

made4 made4

14.2 years ago xiangxue Guo ▴ 70

votes

replies

885

views

made4 made4

14.2 years ago xiangxue Guo ▴ 70

votes

replies

828

views

Cancer made4 ASSIGN Cancer made4 ASSIGN

14.3 years ago Steve Lianoglou ★ 13k

votes

replies

862

views

Network Clustering Cancer Yeast made4 Network Clustering Cancer Yeast made4

16.5 years ago Aedin Culhane ▴ 510

votes

replies

818

views

made4 made4

16.9 years ago Aedin Culhane ▴ 510

votes

replies

1.4k

views

affy made4 affy made4

updated 17.4 years ago by Martin Morgan 25k • written 17.4 years ago by Jenny Drnevich ★ 2.2k

votes

replies

1.4k

views

Classification affy made4 Classification affy made4

updated 17.5 years ago by Aedin Culhane ▴ 510 • written 17.5 years ago by Heike Pospisil ▴ 310

votes

replies

1.4k

views

made4 made4

updated 17.6 years ago by Seth Falcon ★ 7.4k • written 17.6 years ago by Weiwei Shi ★ 1.2k

votes

replies

1.1k

views

Clustering Cancer CGH GLAD made4 Clustering Cancer CGH GLAD made4

17.7 years ago Aedin Culhane ▴ 510

votes

replies

894

views

Clustering Cancer CGH made4 Clustering Cancer CGH made4

17.8 years ago Richard Birnie ▴ 10

votes

replies

1.4k

views

Survival hu6800 cdf probe Biobase genefilter reposTools affy affydata limma gcrma made4

updated 18.1 years ago by Ken Simpson ▴ 70 • written 18.1 years ago by Jenny Drnevich ★ 2.2k

votes

replies

925

views

Biobase affy marray convert made4 Biobase affy marray convert made4

updated 18.4 years ago by Aedin Culhane ▴ 510 • written 18.4 years ago by Jenny Drnevich ★ 2.2k

18 results • Page 1 of 1

Recent ...

Replies

Answer: Method to find pathways different between 2 groups by Gordon Smyth 50k

> When I search camera limma on pubmed, I found 2 papers I am unclear what point you are trying to make. limma's camera method has been fo…

Comment: package goseq seems to be not available on the latest version of R by Gordon Smyth 50k

limma most certainly is available. It installs in R 4.4.0 and Bioc 3.19 for all platforms without any issues. It has not had any period of …

Comment: package goseq seems to be not available on the latest version of R by Patrycja ▴ 20

limma package also isn't available.Is there any information when these packages will be available?

Comment: How to use bootRanges to bootstrap small RNA loci (nullranges package) by Michael Love 41k

Check the number of bootstrapped data per chromosome compared to the original, and then you can also look at its distribution. For this it'…

Comment: DNAString: Standard checksum function? by Henrik Bengtsson ★ 2.4k

For completeness: SEGUID v2 (https://www.seguid.org/), implemented in CRAN package **[seguid](https://cran.r-project.org/package=seguid)*…

Votes

Answer: Why does GSEA on edgeR results for randomized samples give highly significant p-

Handling multiple differential expression comparisons

Answer: fgsea significant result

package goseq seems to be not available on the latest version of R

Awards • All

Scholar to ATpoint ★ 4.1k