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MeDIP-chip data analysis.
MEDME MEDME
15.1 years ago Jinyan Huang ▴ 50
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Help on ROC analysis
Genetics MEDME ASSIGN Genetics MEDME ASSIGN
15.8 years ago Susan Bosco ▴ 80
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Help on ROC Analysis
Genetics ROC MEDME Genetics ROC MEDME
updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 80
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Help on ROC Analysis.
Microarray ROC MEDME Microarray ROC MEDME
updated 15.9 years ago by 21k • written 15.9 years ago by ▴ 260
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updated 16.0 years ago by ★ 4.2k • written 16.0 years ago by ▴ 80
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assistance to understand MEDME
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updated 16.5 years ago by ▴ 200 • written 16.5 years ago by ▴ 90
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MEDME for MeDIP on Affymetrix promoter arrays
PROcess MEDME PROcess MEDME
updated 16.6 years ago by ▴ 200 • written 16.6 years ago by ▴ 330
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Request for the assistance to use MEDME
Microarray Normalization Organism probe limma MEDME cycle ASSIGN Microarray Normalization
updated 16.8 years ago by ▴ 30 • written 16.8 years ago by ▴ 90
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FW: Request for the assistance to use MEDME
Normalization Organism probe MEDME cycle ASSIGN Normalization Organism probe MEDME cycle
updated 16.9 years ago by ▴ 30 • written 16.9 years ago by ▴ 90
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Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112
Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k
we can investigate this issue. thank you for bringing it to our attention
Comment: deseq2 filter the low counts by Michael Love 43k
> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…
Comment: deseq2 filter the low counts by empty_mt • 0
Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …
Comment: deseq2 filter the low counts by Michael Love 43k
Have you seen this part: https://bioconductor.org/packages/release/bioc/vignettes/DESeq2/inst/doc/DESeq2.html#pre-filtering
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Bioconductor 3.22 Released!
Comment: "Watched Tags" are being erased rather than updated
Comment: deseq2 filter the low counts
Answer: DESeq2 interactions
Answer: Important: Bioconductor Release 3.22 Delayed
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