Bioconductor Merge

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5.6k

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sce SingleCellExperiment merge

updated 24 months ago by mollyab12 • 0 • written 2.8 years ago by achoppe ▴ 10

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2.5k

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merge

updated 3.1 years ago by mcmurdie ▴ 20 • written 9.4 years ago by jpleonard2000 ▴ 10

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2.0k

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merge files R packages gene annotations

5.4 years ago mohammedtoufiq91 ▴ 10

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1.3k

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s4 dataframe left_join merge

updated 5.8 years ago by Hervé Pagès 16k • written 5.8 years ago by Michael Steinbaugh ▴ 90

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1.9k

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WGCNA cbind merge match gene names and Eigengene/module/colorlabels

7.2 years ago yifangt ▴ 20

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1.3k

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merge merge data frames

updated 7.7 years ago by Haiying.Kong ▴ 110 • written 7.7 years ago by shadhiksk • 0

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2.3k

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merge rnaseq files

updated 8.4 years ago by jayme.rickman • 0 • written 8.4 years ago by BioinfGuru ▴ 70

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3.7k

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granges merge reduce

updated 8.7 years ago by Michael Lawrence ★ 11k • written 8.7 years ago by nhejazi • 0

8 results • Page 1 of 1

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Comment: How to formulate 2 factor nested design in DESeq2 by Mariane • 0

Hi JK Kim, I'm having a problem similar to the one you reported. Could you please tell me how you solved this problem? Thanks

Comment: batch effect removal for agilent microarray data by gaye.yilmaz • 0

Thank you

Answer: Pathview visualisation not including positive log2 fold changes by James W. MacDonald 68k

Without providing a self-contained example, nobody can tell you if/where you went wrong. Since you get a KEGG pathway with some of the gene…

Comment: Differential variance analysis - can i use deseq2 by Marwan • 0

Thanks Michael for your answer, i didnt mean to use Deseq2 directly for the variance testing, but more like asking if using the (VST) data…

Answer: Differential variance analysis - can i use deseq2 by Michael Love 43k

We don't have a test of differential variance but other Bioconductor packages can, check similar posts (even on the right side bar) or use …

Votes

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Suggesting changing the "reply-to" field to the mailing list address.

Answer: UniProt.ws query for single UniRef90 ID takes several minutes

A: How to extract DESeq2 results for an interaction design

Comment: how should I apply "cpg.annotate" to TCGA methylation data in hg38 for HM450K?

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