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6.6k

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sce SingleCellExperiment merge

updated 2.9 years ago by mollyab12 • 0 • written 3.7 years ago by achoppe ▴ 10

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2.9k

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merge

updated 4.0 years ago by mcmurdie ▴ 20 • written 10.3 years ago by jpleonard2000 ▴ 10

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2.5k

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merge files R packages gene annotations

6.4 years ago mohammedtoufiq91 ▴ 10

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1.7k

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s4 dataframe left_join merge

updated 6.8 years ago by Hervé Pagès 16k • written 6.8 years ago by Michael Steinbaugh ▴ 90

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2.2k

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WGCNA cbind merge match gene names and Eigengene/module/colorlabels

8.1 years ago yifangt ▴ 20

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1.5k

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merge merge data frames

updated 8.6 years ago by Haiying.Kong ▴ 110 • written 8.6 years ago by shadhiksk • 0

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2.7k

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merge rnaseq files

updated 9.3 years ago by jayme.rickman • 0 • written 9.3 years ago by BioinfGuru ▴ 70

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4.1k

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granges merge reduce

updated 9.6 years ago by Michael Lawrence ★ 11k • written 9.6 years ago by nhejazi • 0

8 results • Page 1 of 1

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Comment: Boolean Gate Combination for Any 2 Positive Events in flowWorkspace by TikTsossa33ssalpc • 0

To calculate event numbers for boolean combinations in flow cytometry, you should use a logic gating tool or a script that processes popula…

Comment: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by chp265 • 0

Confirming my understanding after executing the code provided: this is similar to a design formula of `~0+mouse+group+group:allele`, except…

Comment: Combining two proteomics datasets with limpa by Andrew Pattison • 0

Thanks heaps Gordon. I went with option 1 and no normalisation and all seems to have worked well. Cheers, Andrew

Comment: limpa-blank normalization and Spectronaut's PTM stoichiometry by Gordon Smyth 53k

Flagging protein groups as likely contaminants in this way will be fine for a limpa analysis. The `Cont_` proteins can optionally stay in f…

Answer: Making a Full Rank Model for Allele-Specific Expression with DESeq2 by Gordon Smyth 53k

Aaron Lun was a PhD student in my Lab back in 2015, when he posted the answers about allele-specific expression that you and Mike Love have…

Votes

A: DESeq2: Is it possible to convert read counts to expression values via TPM and r

A: Filtering read counts matrix: how to deal with duplicated gene symbols, differen

Comment: limpa analysis advice

Answer: When to use edgeR or limma

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