Bioconductor Merge

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6.4k

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sce SingleCellExperiment merge

updated 2.7 years ago by mollyab12 • 0 • written 3.5 years ago by achoppe ▴ 10

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2.8k

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merge

updated 3.8 years ago by mcmurdie ▴ 20 • written 10.1 years ago by jpleonard2000 ▴ 10

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2.4k

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merge files R packages gene annotations

6.2 years ago mohammedtoufiq91 ▴ 10

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1.6k

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s4 dataframe left_join merge

updated 6.5 years ago by Hervé Pagès 16k • written 6.5 years ago by Michael Steinbaugh ▴ 90

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2.1k

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WGCNA cbind merge match gene names and Eigengene/module/colorlabels

7.9 years ago yifangt ▴ 20

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1.4k

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merge merge data frames

updated 8.4 years ago by Haiying.Kong ▴ 110 • written 8.4 years ago by shadhiksk • 0

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2.6k

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merge rnaseq files

updated 9.1 years ago by jayme.rickman • 0 • written 9.1 years ago by BioinfGuru ▴ 70

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4.0k

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granges merge reduce

updated 9.4 years ago by Michael Lawrence ★ 11k • written 9.4 years ago by nhejazi • 0

8 results • Page 1 of 1

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Answer: Integration: Paired-end vs healthy single-end from a different source by James W. MacDonald 68k

If by reprocess you mean generate libraries and re-sequence, then that's something you could do. Otherwise the biological and technical dif…

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

I can reproduce this and have opened an issue on the code base https://github.com/Bioconductor/support.bioconductor.org/issues/112

Comment: "Watched Tags" are being erased rather than updated by shepherl 4.2k

we can investigate this issue. thank you for bringing it to our attention

Comment: deseq2 filter the low counts by Michael Love 43k

> But within each comparison (contrast), if I trace some DEGs back to the original salmon merged gene counts (or even to normalised counts)…

Comment: deseq2 filter the low counts by empty_mt • 0

Thank you for you suggestion to look at the pre-filtering section in the DESeq2 vignettes - am I missing something? I have 6 treatments, …

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Bioconductor 3.22 Released!

Comment: "Watched Tags" are being erased rather than updated

Comment: deseq2 filter the low counts

Answer: DESeq2 interactions

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