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methods
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Defining BSgenome -> GRanges S4 coercer without package attaching
BSgenome
methods
GenomicRanges
4.6 years ago
Aditya
▴ 160
0
votes
1
reply
760
views
Why does S4Vectors define three functions for Vector -> data.frame coercion
S4Vectors
methods
4.6 years ago
Aditya
▴ 160
2
votes
2
replies
1.0k
views
SetMethod to dispatch on class in unattached package
s4
methods
SummarizedExperiment
updated 5.2 years ago by
Aaron Lun
★ 28k • written 5.2 years ago by
brendan.innes
▴ 20
0
votes
3
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1.1k
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How to clear a cached S4 method
devtools
S4
methods
cache
5.4 years ago
Michael Steinbaugh
▴ 90
0
votes
0
replies
899
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Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution
methods
6.2 years ago
casey.rimland
▴ 150
5 results • Page
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Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
by
winwater0928
• 0
Thank you for your comment! I'll review my code from top to bottom.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
So basically you are using HTML markup to set your subscripts and whatnot, and then `element_markdown` does the rest.
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh snap. Foiled again. Here it is with spaces & ge ; and & lt ;
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Oh LOL. My markdown got edited by the markdown editor! What is between the p and 50 in the first case is the HTML for greater than or equal…
Comment: Math expression in shapeCustom legend in EnhancedVolcano
by
James W. MacDonald
65k
Ah, good point. You could instead try ``` > library(ggtext) > keyvals.shape = c(rep(3,10), rep(2,8)) > names(keyvals.shape) = ifelse(keyva…
Votes
Comment: Opposite sign of LFC in count plots of DEGs (DESeq2)
biomaRt error: database disk image is malformed
Comment: biomaRt : No lock file for BiocFileCache
Answer: Cross-species analysis - how to compute the mid parent value?
Answer: Batch/method effect correction on a cohort of patients with RUVseq and DESeq2
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