Showing : miRNA • reset
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difference between "hsa-miR-xxx" and "hsa-miR-xxx*"
miRNA miRNA
updated 16.3 years ago by ▴ 100 • written 16.3 years ago by ▴ 870
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Affy miRNA
miRNA affy miRNA affy
updated 16.3 years ago by ▴ 580 • written 16.3 years ago by ★ 1.3k
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R: R: How can I trace back transcription target genes from the miRNAs file downloadable from miRbase ?
Transcription miRNA Cancer Homo sapiens biomaRt microRNA Transcription miRNA Cancer
16.3 years ago mauede@alice.it ▴ 870
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Searching miRNA probe ids and annotating probe id lists
miRNA GO cdf probe affy RankProd miRNA GO cdf probe affy RankProd
updated 16.3 years ago by 21k • written 16.3 years ago by ▴ 10
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Affymetrix genechip miRNA array analysis
miRNA limma microRNA miRNA limma microRNA
16.3 years ago Jordi Altirriba Gutiérrez ▴ 350
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R: How can I trace back transcription target genes from the miRNAs file downloadable from miRbase ?
Transcription miRNA Homo sapiens biomaRt Transcription miRNA Homo sapiens biomaRt
updated 16.3 years ago by ▴ 580 • written 16.3 years ago by ▴ 870
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How can I trace back transcription target genes from the miRNAs file downloadable from miRbase ?
Transcription miRNA Transcription miRNA
updated 16.3 years ago by 21k • written 16.3 years ago by ▴ 870
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output from function "matchSeeds"
miRNA miRNA
updated 16.5 years ago by ★ 13k • written 16.5 years ago by ▴ 870
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R: Pairwise Sequence Alignments
miRNA Alignment biomaRt miRNA Alignment biomaRt
16.5 years ago mauede@alice.it ▴ 870
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CDF file for Affy GeneChip miRNA array
miRNA cdf miRNA cdf
updated 16.5 years ago by ▴ 630 • written 16.5 years ago by ★ 4.1k
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how to use writeFASTA in modality "append"
Transcription miRNA Biostrings Transcription miRNA Biostrings
updated 16.5 years ago by 16k • written 16.5 years ago by ▴ 870
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R: how to use writeFASTA in modality "append"
Transcription miRNA Biostrings Transcription miRNA Biostrings
updated 16.5 years ago by ★ 13k • written 16.5 years ago by ▴ 870
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R: is there an identifier that uniquely identifies a gene all over the many databases ?
miRNA miRNA
updated 16.5 years ago by ▴ 150 • written 16.5 years ago by ▴ 870
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Can I use such identifier to interrogate BioMart ?
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
16.6 years ago mauede@alice.it ▴ 870
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one more doubt about the (miRNA, gene-3UTR) pairs from Ensembl and BioMart
miRNA Homo sapiens miRNA Homo sapiens
16.6 years ago mauede@alice.it ▴ 870
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miRNA data analysis for agilent single color data
miRNA miRNA
16.6 years ago Arpith Kishore ▴ 20
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R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics Homo sapiens biomaRt PING miRNA Biophysics Homo sapiens biomaRt PING
updated 16.6 years ago by ★ 3.4k • written 16.6 years ago by ▴ 870
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R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics Biostrings biomaRt miRNA Biophysics Biostrings biomaRt
16.6 years ago mauede@alice.it ▴ 870
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R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics GO Homo sapiens Biostrings biomaRt miRNA Biophysics GO Homo sapiens
16.6 years ago michael watson IAH-C ★ 3.4k
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R: R: R: R: R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Biophysics GO Homo sapiens Biostrings biomaRt miRNA Biophysics GO Homo sapiens
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 870
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4.7k
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how to get the miRNA, identifier from database Ensembl through biomaRt functions ???
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 870
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R: how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
updated 16.6 years ago by ★ 13k • written 16.6 years ago by ▴ 870
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2.0k
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how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
16.6 years ago michael watson IAH-C ★ 3.4k
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1.5k
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how to find the VALIDATED pair (miRNA, gene-3'UTR-sequence)
miRNA Homo sapiens biomaRt miRNA Homo sapiens biomaRt
16.6 years ago mauede@alice.it ▴ 870
0
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2
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2.0k
views
how to find the validated pair (miRNA, gene-3'UTR-sequence)
miRNA Homo sapiens miRNA Homo sapiens
updated 16.6 years ago by 21k • written 16.6 years ago by ▴ 870
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5
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2.1k
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miRNA and validated/predicted target genes
miRNA miRNA
updated 16.6 years ago by ★ 3.4k • written 16.6 years ago by ▴ 870
2
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0
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1.9k
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R: miRNA and validated/predicted target genes
miRNA miRNA
16.6 years ago mauede@alice.it ▴ 870
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1
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1.2k
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miRNA validated/predicted label
miRNA miRNA
updated 16.6 years ago by ★ 3.4k • written 16.6 years ago by ▴ 870
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1.4k
views
Agilent miRNA
miRNA marray miRNA marray
updated 16.9 years ago by ▴ 40 • written 16.9 years ago by ▴ 200
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1
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996
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dye swap control: discrepancy of correlation between R vs R and M vs M
miRNA miRNA
updated 16.9 years ago by ▴ 100 • written 16.9 years ago by ▴ 90
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2
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1.4k
views
Agi4x44PreProcess for miRNA data
miRNA Agi4x44PreProcess miRNA Agi4x44PreProcess
updated 16.9 years ago by ▴ 40 • written 16.9 years ago by ▴ 120
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Creating annotation packages
miRNA Annotation AnnBuilder AnnotationDbi miRNA Annotation AnnBuilder AnnotationDbi
16.9 years ago Gábor Csárdi ▴ 60
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1.2k
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Agi4x44PreProcess for miRNA data
miRNA Agi4x44PreProcess miRNA Agi4x44PreProcess
updated 16.9 years ago by ▴ 190 • written 16.9 years ago by ▴ 40
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RmiR, request for new package
miRNA Annotation GO cdf probe PROcess Category miRNA Annotation GO cdf probe PROcess
16.9 years ago Nishant Gopalakrishnan ▴ 340
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using "lumi" package to read miRNA data
miRNA Annotation lumi miRNA Annotation lumi
16.9 years ago Nusrat Rabbee ▴ 10
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[JOB] National Cancer Institute, Bethesda, MD
Sequencing miRNA Microarray Genetics Cancer Sequencing miRNA Microarray Genetics Cancer
17.0 years ago Sean Davis 21k
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3
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Creating annotation packages
miRNA Annotation AnnBuilder miRNA Annotation AnnBuilder
updated 17.0 years ago by 21k • written 17.0 years ago by ▴ 60
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3
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2.0k
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Genome position to miRNA or gene name
miRNA Alignment GO Cancer BSgenome BSgenome miRNA Alignment GO Cancer BSgenome BSgenome
updated 17.0 years ago by 25k • written 17.0 years ago by ★ 1.9k
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1.4k
views
Quantile normalization of MiRNA array data
miRNA affy miRNA affy
updated 17.2 years ago by ★ 2.4k • written 17.2 years ago by ▴ 30
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5
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How to plot microRNA chromosome location
miRNA ideogram GenomeGraphs rtracklayer microRNA miRNA ideogram GenomeGraphs rtracklayer
updated 17.2 years ago by ▴ 40 • written 17.2 years ago by ▴ 620
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1.7k
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Normalization of Agilent miRNA arrays using spike-ins
miRNA Normalization Preprocessing vsn limma miRNA Normalization Preprocessing vsn limma
updated 17.2 years ago by ★ 13k • written 17.3 years ago by ▴ 60
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2
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replace negative values in Agilent miRNA data
miRNA miRNA
updated 17.2 years ago by ★ 13k • written 17.3 years ago by ▴ 60
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3
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2.1k
views
Bioconductor 2.3 is released
aCGH Sequencing miRNA Microarray Visualization Bayesian Classification Survival Yeast LPE
17.3 years ago • updated 17.2 years ago Patrick Aboyoun ★ 1.6k
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3
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2.5k
views
How to plot microRNA chromosome location
miRNA ideogram GenomeGraphs microRNA miRNA ideogram GenomeGraphs microRNA
updated 17.3 years ago by ★ 13k • written 17.3 years ago by ▴ 40
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1
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2.5k
views
Entrez Gene ID to Probe Set Name
aCGH Sequencing miRNA Microarray Annotation Normalization GO Preprocessing Visualization
updated 17.3 years ago by ★ 7.2k • written 17.3 years ago by ▴ 300
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10
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2.4k
views
Read single channel GenePix in limma [was: Analyze miRNA experiment in Bioconductor]
miRNA Microarray Normalization GO limma miRNA Microarray Normalization GO limma
updated 17.7 years ago by ★ 1.3k • written 17.7 years ago by 53k
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6
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Analyze miRNA experiment in Bioconductor
miRNA GO limma puma miRNA GO limma puma
updated 17.7 years ago by ▴ 220 • written 17.7 years ago by ★ 1.3k
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dependence of log2-ratios on scanning sensitivity?
miRNA miRNA
updated 18.0 years ago by ★ 13k • written 18.0 years ago by ▴ 40
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4
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views
One-Color Agilent miRNA microarrays
miRNA Microarray limma microRNA miRNA Microarray limma microRNA
updated 18.5 years ago by ▴ 60 • written 18.5 years ago by 53k
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1.2k
views
Limma Design
miRNA limma miRNA limma
updated 18.7 years ago by ★ 1.9k • written 18.7 years ago by ▴ 210
250 results • Page 5 of 5
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The design matrix that I described above is completely general. I imagine that it would be possible to use the same approach to generate fu…
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