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Maximum parsimony protein assembly/inference
rforproteomics
proteomics
msnid
msnbase
3.7 years ago
daniel.magnus.bader
▴ 40
4
votes
5
replies
1.7k
views
How to convert a xlsx data file to MSnSet format?
msnbase
msmstests
proteomics
lc-ms/ms
msnID
updated 4.8 years ago by
Laurent Gatto
1.6k • written 4.8 years ago by
fgol
▴ 10
0
votes
14
replies
2.2k
views
Pbase: AddIdentificationData. How can I use MSnId objects (filtered psm) to build the Proteins database
pbase
MsnId
mzid
msnbase
updated 7.8 years ago by
Sebastian Gibb
▴ 80 • written 7.8 years ago by
viswanathan.raghuram
• 0
3 results • Page
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Comment: Normalised counts from RUVg in RUVSeq
by
Shaimaa Gamal
• 0
Hello I was wondering if I should use ruv-corrected counts and ruv lib sizes to create a DGE object that can be used later for DE analysis …
Comment: enrichGOgradient color change
by
James W. MacDonald
64k
You could look at my answer and extrapolate from there.
Comment: enrichGOgradient color change
by
WU
• 0
I would like to ask how to make the counts legend black. Thank you.
Answer: Problems with FLOWAI
by
Alexander
• 0
Hi. The length of the file path, or whether the files are local on the computer has nothing to do with it in my experience. I watched the a…
Answer: Asses fit of variance prior
by
Gordon Smyth
49k
> is it advisable to asses the fit of the variance prior before running limma? No, neither necessary nor possible. If this sort of checki…
Votes
Answer: enrichGOgradient color change
Answer: Filter genes by expression for voomLmFit
Answer: Filter genes by expression for voomLmFit
Answer: Filter genes by expression for voomLmFit
How to know if I should use voomWithQualityWeights() or not?
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