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mutationalpatterns
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1.8k
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Error in seqlevelsStyle after creating a BSgenome package
bsgenome
MutationalPatterns
4.1 years ago • updated 4.0 years ago
sibyl.bertrand
• 0
2
votes
2
replies
991
views
MutationalPatterns Signature Database Versions
MutationalPatterns
3.0 years ago • updated 2.9 years ago
Dario Strbenac
★ 1.5k
0
votes
0
replies
1.4k
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Error in NMF estimation
MutationalPatterns
NMF
5.0 years ago
TRASA
• 0
0
votes
0
replies
662
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Do you know a sofware to draw pedigrees + haplotypes?
SequencingData
STR
MutationalPatterns
pedigree
HapMap
2.8 years ago
Negar
• 0
0
votes
2
replies
603
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could not find function "get_known_signatures"
MutationalPatterns
updated 17 months ago by
Vincent J. Carey, Jr.
6.7k • written 17 months ago by
anton.kratz
▴ 60
5 results • Page
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Comment: Once again a "Model matrix not full rank"
by
James W. MacDonald
65k
You already ran a temporal assay. Now you can compare each time point to the baseline. The interaction term is only applicable if you have…
Comment: Timecourse RNASeq analysis
by
Aurora
• 0
I managed to run ImpulseDE2 as I am interested in getting significant gene changes over time. Now I would like to run deseq as well and com…
Comment: Once again a "Model matrix not full rank"
by
arfranco
▴ 130
But.. How to run a temporal assay?
Comment: Deseq2 and Normalization of RNA sequencing data
by
kcarey
• 0
Noise in terms of expression...to make sure that the information reported is not due to artifacts and actually expression. When I had FPKM …
Answer: NEED FOR NESSASORY HELP
by
Gordon Smyth
50k
Is this quesion related to your earlier question? https://support.bioconductor.org/p/9157127/ If you've already done an edgeR analysis, yo…
Votes
Bioconductor 3.19 is Released!
A: Error in DESeqDataSet : some values in assay are not integers
Bioconductor 3.19 is Released!
Bioconductor 3.19 is Released!
Answer: DEseq2 coefficient
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