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NMF
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0
votes
1
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3.3k
views
NMF installation with current R version
NMF
Biobase
updated 2.2 years ago by
shepherl
3.9k • written 2.2 years ago by
Abhishek
• 0
5
votes
5
replies
1.8k
views
Running NMF for single cell
NMF
scater
3.8 years ago
lirongrossmann
▴ 50
0
votes
0
replies
459
views
NMF in single cell analysis
NMF
ZeiselBrainData
4.0 years ago
sofia.puvogel
• 0
0
votes
0
replies
1.5k
views
Error in NMF estimation
MutationalPatterns
NMF
5.2 years ago
TRASA
• 0
0
votes
7
replies
3.2k
views
nmf function not working
somaticsignatures
NMF
updated 5.7 years ago by
Xin
• 0 • written 6.1 years ago by
aslam.mohammed398
• 0
0
votes
0
replies
841
views
NMF pre-processsing effect on classification
NMF
log2
classification
bioconductor
6.1 years ago
Seymoo
• 0
0
votes
1
reply
1.1k
views
SomaticSignatures for Bioconductor 3.6 (R 3.4.3) depends on NMF, which is not available for R 3.4.3
NMF
somaticsignatures
R 3.4.3
updated 6.4 years ago by
shepherl
3.9k • written 6.4 years ago by
samuel.fux
• 0
0
votes
6
replies
3.0k
views
Somaticsignature NMF problem
somaticsignatures
NMF
updated 6.8 years ago by
grimmmmer
• 0 • written 7.5 years ago by
ns
• 0
0
votes
4
replies
2.5k
views
DESeq2, outlier correction, Combat, NMF
deseq2
combat
outliers
NMF
updated 7.2 years ago by
Michael Love
42k • written 7.2 years ago by
noname
• 0
0
votes
0
replies
1.2k
views
Defining metagenes from NMF in methylation array data - next step?
NMF
minfi
8.4 years ago
yura.grabovska
▴ 30
0
votes
2
replies
1.3k
views
coefmap plot - label colors
affy
coefmap
nmf
updated 8.5 years ago by
James W. MacDonald
66k • written 8.5 years ago by
thrabe
• 0
0
votes
1
reply
1.7k
views
SomaticSignatures: negative entries after ComBat adjustment
sva
somaticsignatures
batch effect
nmf
updated 8.7 years ago by
Jeff Leek
▴ 650 • written 8.7 years ago by
kw10
• 0
0
votes
1
reply
1.5k
views
NMF Package error
NMF
bioconductor
R
updated 9.1 years ago by
Martin Morgan
25k • written 9.1 years ago by
Deepak Tanwar
▴ 10
13 results • Page
1 of 1
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Replies
Comment: 'path' must be string
by
James W. MacDonald
66k
Yes. We already knew that from the error message, and I told you that in my previous email. The point wasn't to figure out *where* the err…
Comment: 'path' must be string
by
cpierce2
• 0
I ran the debugger and this is the line that causes the error: ``` if (any(startsWith(pkcData[["RTS_ID"]][1L], "RTS")) & any(startsWith(pr…
Comment: Generating surrogate variables across multiple variables of interest
by
Robert
• 0
Yes, we have several biomarkers, and a proteomic set, so we are characterizing each biomarker by it's proteomic association(s). The use for…
Comment: Error running tximeta
by
Guido Hooiveld
★ 4.0k
FYI (since I just finalized a run with `salmon`). For each sample (`.`) an output folder is created that contains 3 files (`cmd_info.json`…
Comment: Error running tximeta
by
Michael Love
42k
Tximeta uses the full directory. There are files that give the key information about the transcriptome. It's not a good idea to selectively…
Votes
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
Answer: Understanding how to contrast two treatments in DESeq2
Answer: Understanding how to contrast two treatments in DESeq2
Cannot extract TxFeatures for a defined GRanges object
Limma time series spline help
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Lluís Revilla Sancho
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42k
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★ 1.1k
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